B0TE82 (B0TE82_HELMI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr EMBL ABZ84277.1
Ordered Locus Names:	Helmi_16520
ORF Names:	HM1_1707 EMBL ABZ84277.1

Organism

Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) [Complete proteome] [HAMAP]

Taxonomic identifier

498761 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Heliobacteriaceae › Heliobacterium

Protein attributes

Sequence length	409 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS009006
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS009006
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS009006 RuleBase RU004247
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS009006 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS009006
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0TE82 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 19518DAEBD66016D	FASTA	409	44,403
	10 20 30 40 50 60 MDTALESEIG ENNLPSAVDS QAKGFTAAAG AYPADGRPAW AEIRLSAFAH NLQVLRRATQ 70 80 90 100 110 120 PQARLMAVIK ADGYGHGAVA LAWEAVRQGV DCFVVALLDE ALKLRDAGIT TPILILGYTP 130 140 150 160 170 180 PAACYRVVAE DLSQAVYCRT VAEALSAAAL RLGRTARIHL KVETGMGRVG FQGDEGVREM 190 200 210 220 230 240 LAIARLPGIA VEGVFSHFAT ADEPDKSFAR EQLERFLTIT GRLQQAGLDI PMRHMANSAA 250 260 270 280 290 300 ILDLPESHLE GVRPGIALYG SSPFDGVRWD GAFLVPVMTL KARIIFIKEV AAGTPISYGC 310 320 330 340 350 360 TYRCPRRTRI ATIPLGYADG IRRTLSGRIG AYKGERYFPQ VGRICMDQFM IDIGDAELAE 370 380 390 400 GDEVTLFGRW QEGGTWRTAP VEDWARADGT ISYEILSGIS PRVPRHYVP

References

[1]

"The genome of Heliobacterium modesticaldum, a phototrophic representative of the Firmicutes containing the simplest photosynthetic apparatus." Sattley W.M., Madigan M.T., Swingley W.D., Cheung P.C., Clocksin K.M., Conrad A.L., Dejesa L.C., Honchak B.M., Jung D.O., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Page L.E., Taylor H.L., Wang Z.T., Raymond J., Chen M., Blankenship R.E., Touchman J.W. J. Bacteriol. 190:4687-4696(2008) [PubMed: 18441057] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000930 Genomic DNA. Translation: ABZ84277.1.
RefSeq	YP_001680288.1. NC_010337.2.
3D structure databases
ProteinModelPortal	B0TE82.
ModBase	Search...
Protein-protein interaction databases
STRING	B0TE82.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5909412.
GenomeReviews	Gene locus Helmi_16520 in contig CP000930_GR.
KEGG	hmo:HM1_1707.
PATRIC	22107523. VBIHelMod36755_1535.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG712172.
OMA	NWQIKAL.
Family and domain databases
HAMAP	MF_01201. Ala_racemase. [Tree]
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Gene3D	G3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KO	K01775.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. Alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0TE82_HELMI

Accession

Primary (citable) accession number: B0TE82

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)