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B0TD37

- GLGA_HELMI

UniProt

B0TD37 - GLGA_HELMI

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Protein

Glycogen synthase

Gene

glgA

Organism
Heliobacterium modesticaldum (strain ATCC 51547 / Ice1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei20 – 201ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciHMOD498761:GI46-110-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Helmi_01100
ORF Names:HM1_0110
OrganismiHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)
Taxonomic identifieri498761 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesHeliobacteriaceaeHeliobacterium
ProteomesiUP000008550: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 484484Glycogen synthasePRO_1000126079Add
BLAST

Proteomic databases

PRIDEiB0TD37.

Interactioni

Protein-protein interaction databases

STRINGi498761.HM1_0110.

Structurei

3D structure databases

ProteinModelPortaliB0TD37.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiRYPHCIN.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B0TD37-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTEQPLKVLF VSAEVVPFAK AGGLADVAGS LPRALASSGV DVRVAMPRHG
60 70 80 90 100
QIPRGAYVTD YMVEVDARKE TAVIREGRIE ALPGGKSVPV YFIDNYQYFG
110 120 130 140 150
RENIYGYSDD GERWGFFSRA LLEMLEPIDF IPDILHFNDW QCGPAIALLK
160 170 180 190 200
EEYRHHPAYR RIASVLTVHN LEYQGHFGRD ILQFIGLRQD LFRPDALEFY
210 220 230 240 250
GQVNFMKAGL VFADLINTVS RTYAEEIQTS EYGWGLDGLL RLRHSDLFGI
260 270 280 290 300
VNGIDVEVYD PATDPHIPHH YSADNIEGKK RNKAELQRQF GLPVSEAPLL
310 320 330 340 350
GLVHRLVDQK GIDLFEGIEE ALFREDLQLV VVGQGDPRYE GLFRRLKQHF
360 370 380 390 400
PEKVGLFIGF DTPLAQRVYG GSDFFLMPSR FEPCGLGQLI AFRYGAIPIV
410 420 430 440 450
RSTGGLADTV TDVRFPNGNG VVFEAYQPDR FLEAIRRGLH LYRQKDRWQQ
460 470 480
LIAKVMRLDH SWRRSADEYM QLYGRARRKV NPEL
Length:484
Mass (Da):55,097
Last modified:April 8, 2008 - v1
Checksum:i4A2A40BB3EEC5D48
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000930 Genomic DNA. Translation: ABZ82735.1.
RefSeqiYP_001678746.1. NC_010337.2.

Genome annotation databases

EnsemblBacteriaiABZ82735; ABZ82735; HM1_0110.
GeneIDi5912097.
KEGGihmo:HM1_0110.
PATRICi22104543. VBIHelMod36755_0090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000930 Genomic DNA. Translation: ABZ82735.1 .
RefSeqi YP_001678746.1. NC_010337.2.

3D structure databases

ProteinModelPortali B0TD37.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 498761.HM1_0110.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Proteomic databases

PRIDEi B0TD37.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABZ82735 ; ABZ82735 ; HM1_0110 .
GeneIDi 5912097.
KEGGi hmo:HM1_0110.
PATRICi 22104543. VBIHelMod36755_0090.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi RYPHCIN.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci HMOD498761:GI46-110-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of Heliobacterium modesticaldum, a phototrophic representative of the Firmicutes containing the simplest photosynthetic apparatus."
    Sattley W.M., Madigan M.T., Swingley W.D., Cheung P.C., Clocksin K.M., Conrad A.L., Dejesa L.C., Honchak B.M., Jung D.O., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Page L.E., Taylor H.L., Wang Z.T., Raymond J., Chen M., Blankenship R.E., Touchman J.W.
    J. Bacteriol. 190:4687-4696(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51547 / Ice1.

Entry informationi

Entry nameiGLGA_HELMI
AccessioniPrimary (citable) accession number: B0TD37
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 8, 2008
Last modified: October 1, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3