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B0TD37 (GLGA_HELMI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Helmi_01100
ORF Names:HM1_0110
OrganismHeliobacterium modesticaldum (strain ATCC 51547 / Ice1) [Complete proteome] [HAMAP]
Taxonomic identifier498761 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesHeliobacteriaceaeHeliobacterium

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 484484Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126079

Sites

Binding site201ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B0TD37 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 4A2A40BB3EEC5D48

FASTA48455,097
        10         20         30         40         50         60 
MTEQPLKVLF VSAEVVPFAK AGGLADVAGS LPRALASSGV DVRVAMPRHG QIPRGAYVTD 

        70         80         90        100        110        120 
YMVEVDARKE TAVIREGRIE ALPGGKSVPV YFIDNYQYFG RENIYGYSDD GERWGFFSRA 

       130        140        150        160        170        180 
LLEMLEPIDF IPDILHFNDW QCGPAIALLK EEYRHHPAYR RIASVLTVHN LEYQGHFGRD 

       190        200        210        220        230        240 
ILQFIGLRQD LFRPDALEFY GQVNFMKAGL VFADLINTVS RTYAEEIQTS EYGWGLDGLL 

       250        260        270        280        290        300 
RLRHSDLFGI VNGIDVEVYD PATDPHIPHH YSADNIEGKK RNKAELQRQF GLPVSEAPLL 

       310        320        330        340        350        360 
GLVHRLVDQK GIDLFEGIEE ALFREDLQLV VVGQGDPRYE GLFRRLKQHF PEKVGLFIGF 

       370        380        390        400        410        420 
DTPLAQRVYG GSDFFLMPSR FEPCGLGQLI AFRYGAIPIV RSTGGLADTV TDVRFPNGNG 

       430        440        450        460        470        480 
VVFEAYQPDR FLEAIRRGLH LYRQKDRWQQ LIAKVMRLDH SWRRSADEYM QLYGRARRKV 


NPEL 

« Hide

References

[1]"The genome of Heliobacterium modesticaldum, a phototrophic representative of the Firmicutes containing the simplest photosynthetic apparatus."
Sattley W.M., Madigan M.T., Swingley W.D., Cheung P.C., Clocksin K.M., Conrad A.L., Dejesa L.C., Honchak B.M., Jung D.O., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Page L.E., Taylor H.L., Wang Z.T., Raymond J., Chen M., Blankenship R.E., Touchman J.W.
J. Bacteriol. 190:4687-4696(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51547 / Ice1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000930 Genomic DNA. Translation: ABZ82735.1.
RefSeqYP_001678746.1. NC_010337.2.

3D structure databases

ProteinModelPortalB0TD37.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING498761.HM1_0110.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Proteomic databases

PRIDEB0TD37.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABZ82735; ABZ82735; HM1_0110.
GeneID5912097.
KEGGhmo:HM1_0110.
PATRIC22104543. VBIHelMod36755_0090.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMARYPHCIN.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycHMOD498761:GI46-110-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_HELMI
AccessionPrimary (citable) accession number: B0TD37
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 8, 2008
Last modified: May 14, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways