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B0TD37

- GLGA_HELMI

UniProt

B0TD37 - GLGA_HELMI

Protein

Glycogen synthase

Gene

glgA

Organism
Heliobacterium modesticaldum (strain ATCC 51547 / Ice1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (08 Apr 2008)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei20 – 201ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciHMOD498761:GI46-110-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthaseUniRule annotation
    Gene namesi
    Name:glgAUniRule annotation
    Ordered Locus Names:Helmi_01100
    ORF Names:HM1_0110
    OrganismiHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)
    Taxonomic identifieri498761 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesHeliobacteriaceaeHeliobacterium
    ProteomesiUP000008550: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 484484Glycogen synthasePRO_1000126079Add
    BLAST

    Proteomic databases

    PRIDEiB0TD37.

    Interactioni

    Protein-protein interaction databases

    STRINGi498761.HM1_0110.

    Structurei

    3D structure databases

    ProteinModelPortaliB0TD37.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294940.
    KOiK00703.
    OMAiRYPHCIN.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B0TD37-1 [UniParc]FASTAAdd to Basket

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    MTEQPLKVLF VSAEVVPFAK AGGLADVAGS LPRALASSGV DVRVAMPRHG    50
    QIPRGAYVTD YMVEVDARKE TAVIREGRIE ALPGGKSVPV YFIDNYQYFG 100
    RENIYGYSDD GERWGFFSRA LLEMLEPIDF IPDILHFNDW QCGPAIALLK 150
    EEYRHHPAYR RIASVLTVHN LEYQGHFGRD ILQFIGLRQD LFRPDALEFY 200
    GQVNFMKAGL VFADLINTVS RTYAEEIQTS EYGWGLDGLL RLRHSDLFGI 250
    VNGIDVEVYD PATDPHIPHH YSADNIEGKK RNKAELQRQF GLPVSEAPLL 300
    GLVHRLVDQK GIDLFEGIEE ALFREDLQLV VVGQGDPRYE GLFRRLKQHF 350
    PEKVGLFIGF DTPLAQRVYG GSDFFLMPSR FEPCGLGQLI AFRYGAIPIV 400
    RSTGGLADTV TDVRFPNGNG VVFEAYQPDR FLEAIRRGLH LYRQKDRWQQ 450
    LIAKVMRLDH SWRRSADEYM QLYGRARRKV NPEL 484
    Length:484
    Mass (Da):55,097
    Last modified:April 8, 2008 - v1
    Checksum:i4A2A40BB3EEC5D48
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000930 Genomic DNA. Translation: ABZ82735.1.
    RefSeqiYP_001678746.1. NC_010337.2.

    Genome annotation databases

    EnsemblBacteriaiABZ82735; ABZ82735; HM1_0110.
    GeneIDi5912097.
    KEGGihmo:HM1_0110.
    PATRICi22104543. VBIHelMod36755_0090.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000930 Genomic DNA. Translation: ABZ82735.1 .
    RefSeqi YP_001678746.1. NC_010337.2.

    3D structure databases

    ProteinModelPortali B0TD37.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 498761.HM1_0110.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Proteomic databases

    PRIDEi B0TD37.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABZ82735 ; ABZ82735 ; HM1_0110 .
    GeneIDi 5912097.
    KEGGi hmo:HM1_0110.
    PATRICi 22104543. VBIHelMod36755_0090.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294940.
    KOi K00703.
    OMAi RYPHCIN.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci HMOD498761:GI46-110-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Heliobacterium modesticaldum, a phototrophic representative of the Firmicutes containing the simplest photosynthetic apparatus."
      Sattley W.M., Madigan M.T., Swingley W.D., Cheung P.C., Clocksin K.M., Conrad A.L., Dejesa L.C., Honchak B.M., Jung D.O., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Page L.E., Taylor H.L., Wang Z.T., Raymond J., Chen M., Blankenship R.E., Touchman J.W.
      J. Bacteriol. 190:4687-4696(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51547 / Ice1.

    Entry informationi

    Entry nameiGLGA_HELMI
    AccessioniPrimary (citable) accession number: B0TD37
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3