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B0TAB5

- MNMG_HELMI

UniProt

B0TAB5 - MNMG_HELMI

Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Heliobacterium modesticaldum (strain ATCC 51547 / Ice1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (08 Apr 2008)
      Previous versions | rss
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    Functioni

    NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

    Cofactori

    FAD.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei127 – 1271FAD; via amide nitrogen and carbonyl oxygenUniRule annotation
    Binding sitei182 – 1821FADUniRule annotation
    Binding sitei371 – 3711FADUniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi15 – 206FADUniRule annotation
    Nucleotide bindingi274 – 28815NADUniRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. flavin adenine dinucleotide binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. tRNA wobble uridine modification Source: InterPro

    Keywords - Biological processi

    tRNA processing

    Keywords - Ligandi

    FAD, Flavoprotein, NAD

    Enzyme and pathway databases

    BioCyciHMOD498761:GI46-1056-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
    Alternative name(s):
    Glucose-inhibited division protein AUniRule annotation
    Gene namesi
    Name:mnmGUniRule annotation
    Synonyms:gidAUniRule annotation
    Ordered Locus Names:Helmi_10270
    ORF Names:HM1_0913
    OrganismiHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)
    Taxonomic identifieri498761 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesHeliobacteriaceaeHeliobacterium
    ProteomesiUP000008550: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 637637tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGPRO_0000345279Add
    BLAST

    Interactioni

    Subunit structurei

    Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi498761.HM1_0913.

    Structurei

    3D structure databases

    ProteinModelPortaliB0TAB5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the MnmG family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0445.
    HOGENOMiHOG000201060.
    KOiK03495.
    OMAiFHIEREQ.
    OrthoDBiEOG6W9X6J.

    Family and domain databases

    HAMAPiMF_00129. MnmG_GidA.
    InterProiIPR004416. GidA.
    IPR026904. GidA-assoc_3.
    IPR002218. GIDA-rel.
    IPR020595. GIDA-rel_CS.
    [Graphical view]
    PfamiPF01134. GIDA. 1 hit.
    PF13932. GIDA_assoc_3. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00136. gidA. 1 hit.
    PROSITEiPS01280. GIDA_1. 1 hit.
    PS01281. GIDA_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B0TAB5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTEYVAGKYD VIVIGAGHAG CEAALASARL GAKTLILTIS WDNVALMPCN    50
    PAIGGPAKGH LVREIDALGG QMGLTIDKTC IQIRLLNTGK GPAVHALRAQ 100
    ADKKRYQREM IRVLEHQENL DVRQAMVESV VVEQGRVRGI RTNTGAFFAA 150
    PALVITTGTY LRGRIIIGDL HYPGGPNGYF PSVALAASLR DIGVRLGRFK 200
    TGTPARVDGR TVDFSQMVEQ PGDREPLNFS FLSPRIERKQ ISCWLTYTTE 250
    ETHQIIRDNL HRSPLYAGVI EGTGPRYCPS IEDKVVRFAD KKSHQVFIEP 300
    EGEGTHEMYV QGMSTSLPED VQVTMLRSII GMKDVKIIRP GYAIEYDYVD 350
    PTQLRLSLEH QEIGGLFTAG QINGTSGYEE AAAQGLMAGI NAARFVKGEE 400
    PLVLKRSDAY IGVLIDDLVT KGTNEPYRML TSRAEYRLLL RQDNADQRLT 450
    EIGRSIGLVD DRRYRRFREK MQLLEQEVVR WKSSFVTPGN KKIQAILDEK 500
    KSAPLTKGVS LYDLLRRPEL TYDDLIPLCN DGEKDLPIDP EVAEQVEISA 550
    KFEGYLVKQQ AQVDRFNKLE NKRLPADLDY KRVHGLSNEG RQKLIARKPV 600
    SIGQASRISG VSPADISILL VYLEQQRRLA PGEGGVD 637
    Length:637
    Mass (Da):70,779
    Last modified:April 8, 2008 - v1
    Checksum:i8F06F9D4DB674263
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000930 Genomic DNA. Translation: ABZ83652.1.
    RefSeqiYP_001679663.1. NC_010337.2.

    Genome annotation databases

    EnsemblBacteriaiABZ83652; ABZ83652; HM1_0913.
    GeneIDi5909689.
    KEGGihmo:HM1_0913.
    PATRICi22106309. VBIHelMod36755_0947.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000930 Genomic DNA. Translation: ABZ83652.1 .
    RefSeqi YP_001679663.1. NC_010337.2.

    3D structure databases

    ProteinModelPortali B0TAB5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 498761.HM1_0913.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABZ83652 ; ABZ83652 ; HM1_0913 .
    GeneIDi 5909689.
    KEGGi hmo:HM1_0913.
    PATRICi 22106309. VBIHelMod36755_0947.

    Phylogenomic databases

    eggNOGi COG0445.
    HOGENOMi HOG000201060.
    KOi K03495.
    OMAi FHIEREQ.
    OrthoDBi EOG6W9X6J.

    Enzyme and pathway databases

    BioCyci HMOD498761:GI46-1056-MONOMER.

    Family and domain databases

    HAMAPi MF_00129. MnmG_GidA.
    InterProi IPR004416. GidA.
    IPR026904. GidA-assoc_3.
    IPR002218. GIDA-rel.
    IPR020595. GIDA-rel_CS.
    [Graphical view ]
    Pfami PF01134. GIDA. 1 hit.
    PF13932. GIDA_assoc_3. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00136. gidA. 1 hit.
    PROSITEi PS01280. GIDA_1. 1 hit.
    PS01281. GIDA_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Heliobacterium modesticaldum, a phototrophic representative of the Firmicutes containing the simplest photosynthetic apparatus."
      Sattley W.M., Madigan M.T., Swingley W.D., Cheung P.C., Clocksin K.M., Conrad A.L., Dejesa L.C., Honchak B.M., Jung D.O., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Page L.E., Taylor H.L., Wang Z.T., Raymond J., Chen M., Blankenship R.E., Touchman J.W.
      J. Bacteriol. 190:4687-4696(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51547 / Ice1.

    Entry informationi

    Entry nameiMNMG_HELMI
    AccessioniPrimary (citable) accession number: B0TAB5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 22, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3