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Protein

30S ribosomal protein S16

Gene

rpsP

Organism
Caulobacter sp. (strain K31)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S16UniRule annotation
Gene namesi
Name:rpsPUniRule annotation
Ordered Locus Names:Caul_4888
OrganismiCaulobacter sp. (strain K31)
Taxonomic identifieri366602 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeCaulobacter
Proteomesi
  • UP000001316 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000801391 – 18530S ribosomal protein S16Add BLAST185

Interactioni

Protein-protein interaction databases

STRINGi366602.Caul_4888.

Structurei

3D structure databases

ProteinModelPortaliB0T562.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S16P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5M. Bacteria.
COG0228. LUCA.
HOGENOMiHOG000246720.
KOiK02959.
OMAiENLGIYQ.
OrthoDBiPOG091H00XK.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR020592. Ribosomal_S16_CS.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.
PROSITEiPS00732. RIBOSOMAL_S16. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0T562-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKIRLARGG AKKRPYYSIV VADSHSPRDG RFIEKVGTYN PLLKKDDAAR
60 70 80 90 100
VTLKVESIQA WLAKGAQPTD RVARFLAAQG LVQWTHGNNP EKAKPGKKAQ
110 120 130 140 150
ERDAERTQRD ADRVAAEAQA KEDAKAAAAE AAEAAAAAAA EAAAAPAPEP
160 170 180
EVVAEEAPVE AAAEEAPAAE AAAEEAPASE ETTEG
Length:185
Mass (Da):19,389
Last modified:April 8, 2008 - v1
Checksum:iF3A38ECCCC03D752
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000927 Genomic DNA. Translation: ABZ74008.1.
RefSeqiWP_012288879.1. NC_010338.1.

Genome annotation databases

EnsemblBacteriaiABZ74008; ABZ74008; Caul_4888.
KEGGicak:Caul_4888.
PATRICi21322960. VBICauSp18104_5302.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000927 Genomic DNA. Translation: ABZ74008.1.
RefSeqiWP_012288879.1. NC_010338.1.

3D structure databases

ProteinModelPortaliB0T562.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi366602.Caul_4888.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABZ74008; ABZ74008; Caul_4888.
KEGGicak:Caul_4888.
PATRICi21322960. VBICauSp18104_5302.

Phylogenomic databases

eggNOGiENOG4105K5M. Bacteria.
COG0228. LUCA.
HOGENOMiHOG000246720.
KOiK02959.
OMAiENLGIYQ.
OrthoDBiPOG091H00XK.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR020592. Ribosomal_S16_CS.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.
PROSITEiPS00732. RIBOSOMAL_S16. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS16_CAUSK
AccessioniPrimary (citable) accession number: B0T562
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: April 8, 2008
Last modified: November 2, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.