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B0SXK2 (B0SXK2_CAUSK) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha amylase catalytic region EMBL ABZ73214.1
Gene names
Ordered Locus Names:Caul_4090
OrganismCaulobacter sp. (strain K31) [Complete proteome] [HAMAP]
Taxonomic identifier366602 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Caulobacterales › Caulobacteraceae › Caulobacter

Protein attributes

Sequence length614 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABZ73214.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential EMBL ABZ73214.1
Chain30 – 614585 Potential EMBL ABZ73214.1
PRO_5000308018

Sequences

Sequence LengthMass (Da)Tools
B0SXK2 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 865C9256D9C9C1CD

FASTA61465,954
        10         20         30         40         50         60 
MQIQSAWRRG SASALLAVVA LGAGLAQAAP AARPARPAYL DRAPRDEVIY FVLPDRFANG 

        70         80         90        100        110        120 
DAANDRGNLA GDRLKTGFDP ADKGFFHGGD LAGLTARLGY IQGLGATAIW LGPIFKNKVV 

       130        140        150        160        170        180 
QGPPGQESAG YHGYWITDFT DVDPHFGTRA QMKSFVDAAH ARGLKVYLDI VINHTADVIQ 

       190        200        210        220        230        240 
YRDCPAGGCD YRSKADYPFV RKGGPQGPAI NDGFLGDQAK RQTAGNFARL TRPDYAYTPF 

       250        260        270        280        290        300 
VPKDEEGVKK PAWLNDPIWY HNRGDSRFVG ESSTYGDFSG LDDVATENPR VVQGFIDIYG 

       310        320        330        340        350        360 
QWIDDFGVDG YRIDTARHVN PEFWQAFVPA MLARAKARGI PNFHIFGEVA ETEPGMLANF 

       370        380        390        400        410        420 
TRVDGYPAVL DFAFQGAVAD VVNGKVGTDR LAHLFAQDAL YQGGEAAALQ LPTFLGNHDM 

       430        440        450        460        470        480 
GRIGHFVRGA HPEASEDEIA RRVVLAHAFL MFTRGVPVVY YGDEQGFAGV GGDKDARQDM 

       490        500        510        520        530        540 
FASQVAAYNA DKLVGGAPAT GDHFKTDTVL YQAISAMAGL RQANPALRGG RQVVRASSDK 

       550        560        570        580        590        600 
PGLLAISRST GAGETLVVFN TGLTPLEAQI EVDATSRTWR AAHGACAAAA SAPGSYRVQI 

       610 
GPLDYMICVS EAGQ

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References

[1]"Complete sequence of chromosome of Caulobacter sp. K31."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Stephens C., Richardson P.
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K31.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000927 Genomic DNA. Translation: ABZ73214.1.
RefSeqYP_001685712.1. NC_010338.1.

3D structure databases

ProteinModelPortalB0SXK2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0SXK2.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5901552.
GenomeReviewsGene locus Caul_4090 in contig CP000927_GR.
KEGGcak:Caul_4090.
PATRIC21321352. VBICauSp18104_4502.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG400745.
OMAFHIFGEV.
ProtClustDBCLSK890899.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0SXK2_CAUSK
AccessionPrimary (citable) accession number: B0SXK2
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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