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B0SK30

- B0SK30_LEPBP

UniProt

B0SK30 - B0SK30_LEPBP

Protein

Beta-galactosidase

Gene

LEPBI_I0024

Organism
Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (08 Apr 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei103 – 1031SubstrateUniRule annotation
    Metal bindingi107 – 1071ZincUniRule annotation
    Binding sitei141 – 1411SubstrateUniRule annotation
    Active sitei142 – 1421Proton donorUniRule annotation
    Active sitei304 – 3041NucleophileUniRule annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Ligandi

    Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciLBIF456481:GCM0-24-MONOMER.

    Protein family/group databases

    CAZyiGH42. Glycoside Hydrolase Family 42.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Short name:
    Beta-galUniRule annotation
    Gene namesi
    Ordered Locus Names:LEPBI_I0024Imported
    OrganismiLeptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)Imported
    Taxonomic identifieri456481 [NCBI]
    Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesLeptospiraceaeLeptospira
    ProteomesiUP000001847: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi456481.LEPBI_I0024.

    Structurei

    3D structure databases

    ProteinModelPortaliB0SK30.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1874.
    HOGENOMiHOG000117811.
    KOiK12308.
    OMAiMWHRDKD.
    OrthoDBiEOG6HMX9F.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B0SK30-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIFGACYYPE QWNPKDWDED LKMMKEMGLS SVRLAEFAWG IMEPKEGKFD    50
    FSLFDAILEK IQKQGMTAIL GTPTATFPPW LYQKFPEIVQ ISKEGIIRGI 100
    GTRRQACFSS PAYKKATERI VTAMAKHFGN HPAVVGWQID NEPGHEGSDV 150
    DYSPLAEKNF RIWLKTKYKT LDSLNKRWGN VFWGVIYSDW NQIPLPGAHV 200
    ASNFNPAMIQ DYYRFQSDEL VSYIHFQAEI LRKYSKGKPL TTNLYPSPFL 250
    PVTDMYEMFK KLDYVSWDNY PVWGNQQEPY PHPLVTATQQ YSRGLKDKPY 300
    TVMEQFSGVQ GHDTLGYLPP PGQIGLWLTQ AIVNGANQIY FFRYRTARFG 350
    QEQLCYGILD HGKRKTSKYF ELKKTIEEIK EFAEDIAASP YPAKVAILHD 400
    IENSRNYKHQ PLSDGLKFSP VPFAQVGYDI ELATWFAGTN VLNVNTHSLP 450
    IQREQDWSNY KVLTLPLYTM FGPEIVEKLK AYVQEGGTLV LGYRSGIKDK 500
    DHWMVEEPVP GVFSEMAGVE VFQFEAPATD KVGIKMGIWP LKGSKFCEIL 550
    EPTSAKVIAR YRDKKKFYSG KPAITVNSFG KGKVYYVGTS LTPESFVLLY 600
    RKILKGAGIP FGFLGATIER HFREGKKYNY EITMNHSNQY KLAGFSVLKP 650
    FGYQIKRIQK 660
    Length:660
    Mass (Da):75,646
    Last modified:April 8, 2008 - v1
    Checksum:i8619CAC0AAA94AA8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000786 Genomic DNA. Translation: ABZ96171.1.
    RefSeqiWP_012387062.1. NC_010602.1.
    YP_001837447.1. NC_010602.1.

    Genome annotation databases

    EnsemblBacteriaiABZ96171; ABZ96171; LEPBI_I0024.
    GeneIDi6224131.
    KEGGilbi:LEPBI_I0024.
    PATRICi22346740. VBILepBif123590_0025.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000786 Genomic DNA. Translation: ABZ96171.1 .
    RefSeqi WP_012387062.1. NC_010602.1.
    YP_001837447.1. NC_010602.1.

    3D structure databases

    ProteinModelPortali B0SK30.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 456481.LEPBI_I0024.

    Protein family/group databases

    CAZyi GH42. Glycoside Hydrolase Family 42.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABZ96171 ; ABZ96171 ; LEPBI_I0024 .
    GeneIDi 6224131.
    KEGGi lbi:LEPBI_I0024.
    PATRICi 22346740. VBILepBif123590_0025.

    Phylogenomic databases

    eggNOGi COG1874.
    HOGENOMi HOG000117811.
    KOi K12308.
    OMAi MWHRDKD.
    OrthoDBi EOG6HMX9F.

    Enzyme and pathway databases

    BioCyci LBIF456481:GCM0-24-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the saprophyte Leptospira biflexa provides insights into the evolution of Leptospira and the pathogenesis of leptospirosis."
      Picardeau M., Bulach D.M., Bouchier C., Zuerner R.L., Zidane N., Wilson P.J., Creno S., Kuczek E.S., Bommezzadri S., Davis J.C., McGrath A., Johnson M.J., Boursaux-Eude C., Seemann T., Rouy Z., Coppel R.L., Rood J.I., Lajus A.
      , Davies J.K., Medigue C., Adler B.
      PLoS ONE 3:E1607-E1607(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Patoc 1 / ATCC 23582 / ParisImported.

    Entry informationi

    Entry nameiB0SK30_LEPBP
    AccessioniPrimary (citable) accession number: B0SK30
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 8, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3