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B0SIF0 (B0SIF0_LEPBA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Name:alr EMBL ABZ95984.1
Ordered Locus Names:LBF_4162 EMBL ABZ95984.1
OrganismLeptospira biflexa serovar Patoc (strain Patoc 1 / Ames) [Complete proteome] [HAMAP] EMBL ABZ95984.1
Taxonomic identifier355278 [NCBI]
Taxonomic lineageBacteria › Spirochaetes › Spirochaetales › Leptospiraceae › Leptospira ›

Protein attributes

Sequence length376 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase SAAS SAAS020622 RuleBase RU000608
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B0SIF0 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 7DA1FEDC37A79876

FASTA37641,498
        10         20         30         40         50         60 
MQSSQIYLSR SAFSHNIALF RKLIGPKSKF TAVVKSNAYG HGLLATASIA LDAGADYLGV 

        70         80         90        100        110        120 
NSLEEALSIR RVFSKATILI MGSIPHLKER VAELADENFW VMVSRIEEME LLAKLSPTPK 

       130        140        150        160        170        180 
IHLKVDTGMS RLGIPHQNAE VIAKEIAEKK LPLTGIATHF ASTEDFTEHS HSMLQLGNFQ 

       190        200        210        220        230        240 
DTIDTFAKHG FIDLICHCAS SASAMLFSEA RMDLVRVGIS LYGLWPSLET KLSLSLMKKD 

       250        260        270        280        290        300 
VGMLKPALTW KTQIQHIQNL NPGTFVGYGS TFKTTHETRL AVVPVGYYEG LDRKLSNHGY 

       310        320        330        340        350        360 
MLVHGERAKI LGRICMNMTM LDITHIPDAK IGDDVVIIGK SGNEMISADD HATWTGTINY 

       370 
EVVTKILGSF PRIIED

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References

[1]"Genome Sequence of the Saprophyte Leptospira biflexa Provides Insights into the Evolution of Leptospira and the Pathogenesis of Leptospirosis."
Picardeau M., Bulach D.M., Bouchier C., Zuerner R.L., Zidane N., Wilson P.J., Creno S., Kuczek E.S., Bommezzadri S., Davis J.C., McGrath A., Johnson M.J., Boursaux-Eude C., Seemann T., Rouy Z., Coppel R.L., Rood J.I., Lajus A. expand/collapse author list , Davies J.K., Medigue C., Adler B.
PLoS ONE 3:E1607-E1607(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Patoc 1 / Ames.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000778 Genomic DNA. Translation: ABZ95984.1.
RefSeqYP_001964897.1. NC_010845.1.

3D structure databases

ProteinModelPortalB0SIF0.
ModBaseSearch...

Protein-protein interaction databases

STRING355278.LBF_4162.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABZ95984; ABZ95984; LBF_4162.
GeneID6390378.
KEGGlbf:LBF_4162.
PATRIC22346338. VBILepBif95142_3706.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMASIQDYEY.
ProtClustDBCLSK575426.

Enzyme and pathway databases

BioCycLBIF355278:GHTJ-218-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0SIF0_LEPBA
AccessionPrimary (citable) accession number: B0SIF0
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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