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B0SEK6

- B0SEK6_LEPBA

UniProt

B0SEK6 - B0SEK6_LEPBA

Protein
Submitted name:

Oxoglutarate dehydrogenase (Lipoamide), dehydrogenase (E1) component

Gene

sucA

Organism
Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (08 Apr 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Enzyme and pathway databases

    BioCyciLBIF355278:GHTJ-1021-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Oxoglutarate dehydrogenase (Lipoamide), dehydrogenase (E1) componentImported
    Gene namesi
    Name:sucAImported
    Ordered Locus Names:LBF_1022Imported
    OrganismiLeptospira biflexa serovar Patoc (strain Patoc 1 / Ames)Imported
    Taxonomic identifieri355278 [NCBI]
    Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesLeptospiraceaeLeptospira
    ProteomesiUP000001846: Chromosome I

    Interactioni

    Protein-protein interaction databases

    STRINGi355278.LBF_1022.

    Structurei

    3D structure databases

    ProteinModelPortaliB0SEK6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0567.
    HOGENOMiHOG000259588.
    KOiK00164.
    OMAiDDVEACT.
    OrthoDBiEOG6V1M1F.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B0SEK6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTTDQMMSLY GDNVVLLEEY YKQFKEDPSS LTKDWIDFFQ ELERTSFSNN    50
    GSNGGGFNGN GYVNYTSTEH RKDSSLSDFG IINLLNAYRR QGHLAANLDP 100
    LGINKPNREF IDLKIKALKE SDLDTEVDSG IANLGKTKLK NVIDWFEKTY 150
    CGSIGCEHYY LVNDEEREWL QNRMEPLANN DPISKKTALR LFEKLYQADS 200
    FENFLAKKFV GKKRFSLEGG ETMIPMLDTL VEEAGGHKMD ALVIGMAHRG 250
    RLNVLVNIIR KPAGLIFAEF EEKLNPGQLG YADVKYHLGY SNHVMTHYGK 300
    EVKLSLAFNP SHLEAVDPVI FGSVRARQEM AKDTDRSKFM PVAIHGDAAF 350
    AGQGVVAETL NMMNLEGYTV GGTFHIVINN QIGFTTLPSE SRSTLYATDL 400
    AKGFQVPIFH VNGDDPEAAY RVTKLALEYR QKFKKDVIID LICYRRLGHN 450
    ETDEPSFTQP QMYDIIKKHP KTISLYEQRL LQRGDITPEE IQFIKDGIAQ 500
    GLEDSFQQAK EKDTRITVDT LGGVWSRYTK EPLDSDVHTE LLQQQLGGIV 550
    KAVTTLPEGY TANPKHIKVL EDRKKMGAGE LPIDWGFAEA LSFGSILENG 600
    FPIRLGGQDA QRGTFSHRHA TLSDIVNGKK LTLLNHISDK QAKIEIVNSS 650
    LSEYSCLGFE YGFSLADPSS LVMWEAQFGD FANNAQVIFD QFISSSEIKW 700
    QRMSGLVCLL PHGYEGQGPE HSSARLERFL QLCALDNIQV ANLTTPAQYF 750
    HILRRQILQS FRKPLIIMTP KSLLRLKDAA SSLEDITTGA FKKILPDPVA 800
    KPEKVEKLLF CSGKVYYDLR KAIDNQKLEN VAVVRIEQLY PFPENHIKQM 850
    ITSYGKLKKF VWVQEEPKNQ GAWFFVRDRI EALMPENKRL HYAGRSEFPS 900
    PACGHVVTHL KEQEDLVKDA LS 922
    Length:922
    Mass (Da):104,239
    Last modified:April 8, 2008 - v1
    Checksum:iA192630A211E0BA5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000777 Genomic DNA. Translation: ABZ93549.1.
    RefSeqiYP_001962127.1. NC_010842.1.

    Genome annotation databases

    EnsemblBacteriaiABZ93549; ABZ93549; LBF_1022.
    GeneIDi6386863.
    KEGGilbf:LBF_1022.
    PATRICi22341015. VBILepBif95142_1077.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000777 Genomic DNA. Translation: ABZ93549.1 .
    RefSeqi YP_001962127.1. NC_010842.1.

    3D structure databases

    ProteinModelPortali B0SEK6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 355278.LBF_1022.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABZ93549 ; ABZ93549 ; LBF_1022 .
    GeneIDi 6386863.
    KEGGi lbf:LBF_1022.
    PATRICi 22341015. VBILepBif95142_1077.

    Phylogenomic databases

    eggNOGi COG0567.
    HOGENOMi HOG000259588.
    KOi K00164.
    OMAi DDVEACT.
    OrthoDBi EOG6V1M1F.

    Enzyme and pathway databases

    BioCyci LBIF355278:GHTJ-1021-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the saprophyte Leptospira biflexa provides insights into the evolution of Leptospira and the pathogenesis of leptospirosis."
      Picardeau M., Bulach D.M., Bouchier C., Zuerner R.L., Zidane N., Wilson P.J., Creno S., Kuczek E.S., Bommezzadri S., Davis J.C., McGrath A., Johnson M.J., Boursaux-Eude C., Seemann T., Rouy Z., Coppel R.L., Rood J.I., Lajus A.
      , Davies J.K., Medigue C., Adler B.
      PLoS ONE 3:E1607-E1607(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Patoc 1 / AmesImported.

    Entry informationi

    Entry nameiB0SEK6_LEPBA
    AccessioniPrimary (citable) accession number: B0SEK6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 8, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3