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B0SEK6

- B0SEK6_LEPBA

UniProt

B0SEK6 - B0SEK6_LEPBA

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Protein
Submitted name:

Oxoglutarate dehydrogenase (Lipoamide), dehydrogenase (E1) component

Gene

sucA

Organism
Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLBIF355278:GHTJ-1021-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenase (Lipoamide), dehydrogenase (E1) componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:LBF_1022Imported
OrganismiLeptospira biflexa serovar Patoc (strain Patoc 1 / Ames)Imported
Taxonomic identifieri355278 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesLeptospiraceaeLeptospira
ProteomesiUP000001846: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi355278.LBF_1022.

Structurei

3D structure databases

ProteinModelPortaliB0SEK6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiDDVEACT.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

B0SEK6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTDQMMSLY GDNVVLLEEY YKQFKEDPSS LTKDWIDFFQ ELERTSFSNN
60 70 80 90 100
GSNGGGFNGN GYVNYTSTEH RKDSSLSDFG IINLLNAYRR QGHLAANLDP
110 120 130 140 150
LGINKPNREF IDLKIKALKE SDLDTEVDSG IANLGKTKLK NVIDWFEKTY
160 170 180 190 200
CGSIGCEHYY LVNDEEREWL QNRMEPLANN DPISKKTALR LFEKLYQADS
210 220 230 240 250
FENFLAKKFV GKKRFSLEGG ETMIPMLDTL VEEAGGHKMD ALVIGMAHRG
260 270 280 290 300
RLNVLVNIIR KPAGLIFAEF EEKLNPGQLG YADVKYHLGY SNHVMTHYGK
310 320 330 340 350
EVKLSLAFNP SHLEAVDPVI FGSVRARQEM AKDTDRSKFM PVAIHGDAAF
360 370 380 390 400
AGQGVVAETL NMMNLEGYTV GGTFHIVINN QIGFTTLPSE SRSTLYATDL
410 420 430 440 450
AKGFQVPIFH VNGDDPEAAY RVTKLALEYR QKFKKDVIID LICYRRLGHN
460 470 480 490 500
ETDEPSFTQP QMYDIIKKHP KTISLYEQRL LQRGDITPEE IQFIKDGIAQ
510 520 530 540 550
GLEDSFQQAK EKDTRITVDT LGGVWSRYTK EPLDSDVHTE LLQQQLGGIV
560 570 580 590 600
KAVTTLPEGY TANPKHIKVL EDRKKMGAGE LPIDWGFAEA LSFGSILENG
610 620 630 640 650
FPIRLGGQDA QRGTFSHRHA TLSDIVNGKK LTLLNHISDK QAKIEIVNSS
660 670 680 690 700
LSEYSCLGFE YGFSLADPSS LVMWEAQFGD FANNAQVIFD QFISSSEIKW
710 720 730 740 750
QRMSGLVCLL PHGYEGQGPE HSSARLERFL QLCALDNIQV ANLTTPAQYF
760 770 780 790 800
HILRRQILQS FRKPLIIMTP KSLLRLKDAA SSLEDITTGA FKKILPDPVA
810 820 830 840 850
KPEKVEKLLF CSGKVYYDLR KAIDNQKLEN VAVVRIEQLY PFPENHIKQM
860 870 880 890 900
ITSYGKLKKF VWVQEEPKNQ GAWFFVRDRI EALMPENKRL HYAGRSEFPS
910 920
PACGHVVTHL KEQEDLVKDA LS
Length:922
Mass (Da):104,239
Last modified:April 8, 2008 - v1
Checksum:iA192630A211E0BA5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000777 Genomic DNA. Translation: ABZ93549.1.
RefSeqiYP_001962127.1. NC_010842.1.

Genome annotation databases

EnsemblBacteriaiABZ93549; ABZ93549; LBF_1022.
GeneIDi6386863.
KEGGilbf:LBF_1022.
PATRICi22341015. VBILepBif95142_1077.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000777 Genomic DNA. Translation: ABZ93549.1 .
RefSeqi YP_001962127.1. NC_010842.1.

3D structure databases

ProteinModelPortali B0SEK6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 355278.LBF_1022.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABZ93549 ; ABZ93549 ; LBF_1022 .
GeneIDi 6386863.
KEGGi lbf:LBF_1022.
PATRICi 22341015. VBILepBif95142_1077.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259588.
KOi K00164.
OMAi DDVEACT.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci LBIF355278:GHTJ-1021-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the saprophyte Leptospira biflexa provides insights into the evolution of Leptospira and the pathogenesis of leptospirosis."
    Picardeau M., Bulach D.M., Bouchier C., Zuerner R.L., Zidane N., Wilson P.J., Creno S., Kuczek E.S., Bommezzadri S., Davis J.C., McGrath A., Johnson M.J., Boursaux-Eude C., Seemann T., Rouy Z., Coppel R.L., Rood J.I., Lajus A.
    , Davies J.K., Medigue C., Adler B.
    PLoS ONE 3:E1607-E1607(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Patoc 1 / AmesImported.

Entry informationi

Entry nameiB0SEK6_LEPBA
AccessioniPrimary (citable) accession number: B0SEK6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: October 1, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3