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B0SEK6

- B0SEK6_LEPBA

UniProt

B0SEK6 - B0SEK6_LEPBA

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Protein
Submitted name:

Oxoglutarate dehydrogenase (Lipoamide), dehydrogenase (E1) component

Gene
sucA, LBF_1022
Organism
Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLBIF355278:GHTJ-1021-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenase (Lipoamide), dehydrogenase (E1) componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:LBF_1022Imported
OrganismiLeptospira biflexa serovar Patoc (strain Patoc 1 / Ames)Imported
Taxonomic identifieri355278 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesLeptospiraceaeLeptospira
ProteomesiUP000001846: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi355278.LBF_1022.

Structurei

3D structure databases

ProteinModelPortaliB0SEK6.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiDDVEACT.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

B0SEK6-1 [UniParc]FASTAAdd to Basket

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MTTDQMMSLY GDNVVLLEEY YKQFKEDPSS LTKDWIDFFQ ELERTSFSNN    50
GSNGGGFNGN GYVNYTSTEH RKDSSLSDFG IINLLNAYRR QGHLAANLDP 100
LGINKPNREF IDLKIKALKE SDLDTEVDSG IANLGKTKLK NVIDWFEKTY 150
CGSIGCEHYY LVNDEEREWL QNRMEPLANN DPISKKTALR LFEKLYQADS 200
FENFLAKKFV GKKRFSLEGG ETMIPMLDTL VEEAGGHKMD ALVIGMAHRG 250
RLNVLVNIIR KPAGLIFAEF EEKLNPGQLG YADVKYHLGY SNHVMTHYGK 300
EVKLSLAFNP SHLEAVDPVI FGSVRARQEM AKDTDRSKFM PVAIHGDAAF 350
AGQGVVAETL NMMNLEGYTV GGTFHIVINN QIGFTTLPSE SRSTLYATDL 400
AKGFQVPIFH VNGDDPEAAY RVTKLALEYR QKFKKDVIID LICYRRLGHN 450
ETDEPSFTQP QMYDIIKKHP KTISLYEQRL LQRGDITPEE IQFIKDGIAQ 500
GLEDSFQQAK EKDTRITVDT LGGVWSRYTK EPLDSDVHTE LLQQQLGGIV 550
KAVTTLPEGY TANPKHIKVL EDRKKMGAGE LPIDWGFAEA LSFGSILENG 600
FPIRLGGQDA QRGTFSHRHA TLSDIVNGKK LTLLNHISDK QAKIEIVNSS 650
LSEYSCLGFE YGFSLADPSS LVMWEAQFGD FANNAQVIFD QFISSSEIKW 700
QRMSGLVCLL PHGYEGQGPE HSSARLERFL QLCALDNIQV ANLTTPAQYF 750
HILRRQILQS FRKPLIIMTP KSLLRLKDAA SSLEDITTGA FKKILPDPVA 800
KPEKVEKLLF CSGKVYYDLR KAIDNQKLEN VAVVRIEQLY PFPENHIKQM 850
ITSYGKLKKF VWVQEEPKNQ GAWFFVRDRI EALMPENKRL HYAGRSEFPS 900
PACGHVVTHL KEQEDLVKDA LS 922
Length:922
Mass (Da):104,239
Last modified:April 8, 2008 - v1
Checksum:iA192630A211E0BA5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000777 Genomic DNA. Translation: ABZ93549.1.
RefSeqiYP_001962127.1. NC_010842.1.

Genome annotation databases

EnsemblBacteriaiABZ93549; ABZ93549; LBF_1022.
GeneIDi6386863.
KEGGilbf:LBF_1022.
PATRICi22341015. VBILepBif95142_1077.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000777 Genomic DNA. Translation: ABZ93549.1 .
RefSeqi YP_001962127.1. NC_010842.1.

3D structure databases

ProteinModelPortali B0SEK6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 355278.LBF_1022.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABZ93549 ; ABZ93549 ; LBF_1022 .
GeneIDi 6386863.
KEGGi lbf:LBF_1022.
PATRICi 22341015. VBILepBif95142_1077.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259588.
KOi K00164.
OMAi DDVEACT.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci LBIF355278:GHTJ-1021-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the saprophyte Leptospira biflexa provides insights into the evolution of Leptospira and the pathogenesis of leptospirosis."
    Picardeau M., Bulach D.M., Bouchier C., Zuerner R.L., Zidane N., Wilson P.J., Creno S., Kuczek E.S., Bommezzadri S., Davis J.C., McGrath A., Johnson M.J., Boursaux-Eude C., Seemann T., Rouy Z., Coppel R.L., Rood J.I., Lajus A.
    , Davies J.K., Medigue C., Adler B.
    PLoS ONE 3:E1607-E1607(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Patoc 1 / Ames.

Entry informationi

Entry nameiB0SEK6_LEPBA
AccessioniPrimary (citable) accession number: B0SEK6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: September 3, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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