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Protein
Submitted name:

Sigma factor regulatory protein

Gene

LBF_0893

Organism
Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLBIF355278:GHTJ-893-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor regulatory proteinImported
Gene namesi
Ordered Locus Names:LBF_0893Imported
OrganismiLeptospira biflexa serovar Patoc (strain Patoc 1 / Ames)Imported
Taxonomic identifieri355278 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesLeptospiraceaeLeptospira
ProteomesiUP000001846: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi355278.LBF_0893.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000040549.
OMAiITAVERW.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

B0SDX4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTRSFYIYFK EIFHKPTRQE WDILKLAEPR FEKEYTYSVF LTHFIVYSLL
60 70 80 90 100
FVPPFADFRW DILPYLLGVT IIRFVLLLQF YTKSISLEKV IYLSGIIADG
110 120 130 140 150
LVYIVFIKGI QSFPSIGNFY LLNSYLMSFI IPILLYSTRL NPFGCVLSAI
160 170 180 190 200
YFSIFHFSYI LNLPIELQNQ TSLFSQYFLI IVYWGSALLG VVFVFNKRKD
210 220 230 240 250
TADVYSLSEE KRFMLQELEL AKKVQDALFP GNIKIPNLTF TFYRKSPNVI
260 270 280 290 300
GGDFFDFVQL REGNVGVFLT DVAGHGISSA MVASIMKVLV STIPYRFKTA
310 320 330 340 350
PARLMDYLDD RLTQDLNRYH ASAIYLFFDF IEKKLTIGNA GHPYLILAKK
360 370 380 390 400
GEEFQELETQ GAILGFNIKV PPISEKTLPI AQGDRFFIYT DGLIESMDHQ
410 420 430 440 450
GNCLGTEGLL DLLNRHKHCE NVKELETQLL DELKTKYGLD TFSDDTMFLI

LEVEE
Length:455
Mass (Da):52,562
Last modified:April 8, 2008 - v1
Checksum:i1489F1AA023D6CC3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000777 Genomic DNA. Translation: ABZ93424.1.
RefSeqiYP_001962002.1. NC_010842.1.

Genome annotation databases

EnsemblBacteriaiABZ93424; ABZ93424; LBF_0893.
GeneIDi6388589.
KEGGilbf:LBF_0893.
PATRICi22340737. VBILepBif95142_0939.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000777 Genomic DNA. Translation: ABZ93424.1.
RefSeqiYP_001962002.1. NC_010842.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi355278.LBF_0893.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABZ93424; ABZ93424; LBF_0893.
GeneIDi6388589.
KEGGilbf:LBF_0893.
PATRICi22340737. VBILepBif95142_0939.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000040549.
OMAiITAVERW.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciLBIF355278:GHTJ-893-MONOMER.

Family and domain databases

InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the saprophyte Leptospira biflexa provides insights into the evolution of Leptospira and the pathogenesis of leptospirosis."
    Picardeau M., Bulach D.M., Bouchier C., Zuerner R.L., Zidane N., Wilson P.J., Creno S., Kuczek E.S., Bommezzadri S., Davis J.C., McGrath A., Johnson M.J., Boursaux-Eude C., Seemann T., Rouy Z., Coppel R.L., Rood J.I., Lajus A.
    , Davies J.K., Medigue C., Adler B.
    PLoS ONE 3:E1607-E1607(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Patoc 1 / AmesImported.

Entry informationi

Entry nameiB0SDX4_LEPBA
AccessioniPrimary (citable) accession number: B0SDX4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: January 7, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.