B0S6I5 (B0S6I5_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Myogenin Ensembl ENSDARP00000010347 EMBL CAQ14920.1

Gene names

Name:	myog Ensembl ENSDARP00000010347 ZFIN ZDB-GENE-980526-265
ORF Names:	CH211-86H15.2-001 EMBL CAQ14920.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAQ14920.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Efficient DNA binding requires dimerization with another bHLH protein By similarity. RuleBase RU003428
Sequence similarities	Contains 1 basic helix-loop-helix (bHLH) domain. RuleBase RU003428

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU003428
Ligand	DNA-binding RuleBase RU003428
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	muscle organ development Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro response to stress Inferred from direct assay. Source: ZFIN
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0S6I5 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: A48CBB310006FE2C	FASTA	256	28,342
	10 20 30 40 50 60 MELFETNPYF FNDQRFYEGA DNFFQSRING GFEQAGYQDR SSMMGLCGDG RMLTTTVGLE 70 80 90 100 110 120 DKPSPSSSLG LSMSPHQEQQ HCPGQCLPWA CKVCKRKSVT MDRRKAATLR EKRRLKKVNE 130 140 150 160 170 180 AFEALKRSTL MNPNQRLPKV EILRSAIQYI ERLQALVSSL NQQEHEQGNL HYRATAAAPH 190 200 210 220 230 240 TGVSSSSDQG SGSTCCSSPE WSSASDHCVP AYSSAHEDLL NDDSSEQSNL RSLTSIVDSI 250 TGTEATPVAY SVDISK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Beasley H. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000010347.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000010347.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX537143 Genomic DNA. Translation: CAQ14920.1.
IPI	IPI00505141.
UniGene	Dr.77095.
3D structure databases
ProteinModelPortal	B0S6I5.
SMR	B0S6I5. Positions 95-157.
ModBase	Search...
Protein-protein interaction databases
STRING	B0S6I5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000014062; ENSDARP00000010347; ENSDARG00000009438.
Organism-specific databases
ZFIN	ZDB-GENE-980526-265. myog.
Phylogenomic databases
HOGENOM	HBG714454.
HOVERGEN	HBG006429.
OMA	LNQQDTE.
OrthoDB	EOG4RR6JP.
PhylomeDB	B0S6I5.
Gene expression databases
Bgee	B0S6I5.
Family and domain databases
InterPro	IPR002546. Basic. IPR011598. HLH_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.280.10. HLH_DNA_bd. 1 hit.
Pfam	PF01586. Basic. 1 hit. PF00010. HLH. 1 hit. [Graphical view]
SMART	SM00520. BASIC. 1 hit. SM00353. HLH. 1 hit. [Graphical view]
SUPFAM	SSF47459. HLH_basic. 1 hit.
PROSITE	PS50888. HLH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0S6I5_DANRE

Accession

Primary (citable) accession number: B0S6I5

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)