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Protein
Submitted name:

Protein O-fucosyltransferase 2

Gene

pofut2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseImported, Transferase

Enzyme and pathway databases

ReactomeiR-DRE-5173214. O-glycosylation of TSR domain-containing proteins.

Protein family/group databases

CAZyiGT68. Glycosyltransferase Family 68.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-fucosyltransferase 2Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:pofut2Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 9

Organism-specific databases

ZFINiZDB-GENE-030131-3595. pofut2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2822HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000066423.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IFPR. Eukaryota.
ENOG410Y78N. LUCA.
GeneTreeiENSGT00390000007989.
HOGENOMiHOG000015874.
HOVERGENiHBG053367.
KOiK03691.
OMAiCSHARFF.
OrthoDBiEOG76T9S1.
PhylomeDBiB0S641.
TreeFamiTF314337.

Family and domain databases

InterProiIPR019378. GDP-Fuc_O-FucTrfase.
[Graphical view]
PfamiPF10250. O-FucT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0S641-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATNRGTAVS VHLHHILGYI TVFIFVILSS NSSSASEDDA FRAGQSMFSP
60 70 80 90 100
VAAASRDVRY LLYDVNPPEG FNLRRDVYIR MATLLKTLRK EGDWVLVLPP
110 120 130 140 150
WGRLYHWQSP EIHQLRIPWG EFFSITSLQA NIPVIEYEEF IAESGGPFID
160 170 180 190 200
QILVLQSYAE GWTDGKWEEK VDDRPCIEKL MYSKDKQGYY RGWFWGFEET
210 220 230 240 250
RALNVTCLSA QGHASILAPV LQNNITATSV MVDRAETVLH DHYAGKDYWD
260 270 280 290 300
TRRSMVFAKH LRIIGDKFRA NHLNSTDKQD QTPYNEDWTQ MKNPLGSAKG
310 320 330 340 350
GPYLGVHLRR KDFIWGHRED VPSLKGAVKK IRSLMKKHKL LQVFVATDAD
360 370 380 390 400
EEELAKLKRL LPEMVRFEPS LEDLELLKDG GVAIIDQWIC AHARFFIGTS
410 420 430 440
VSTFSFRIHE EREILGFDPK TTYNRFCGDV EQECEQPTHW KIVY
Length:444
Mass (Da):51,137
Last modified:April 8, 2008 - v1
Checksum:iD5D85CE43415D503
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX323586 Genomic DNA. No translation available.
BC163087 mRNA. Translation: AAI63087.1.
BC163097 mRNA. Translation: AAI63097.1.
RefSeqiNP_001071098.2. NM_001077630.2.
UniGeneiDr.79126.

Genome annotation databases

EnsembliENSDART00000066424; ENSDARP00000066423; ENSDARG00000045175.
GeneIDi777668.
KEGGidre:777668.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX323586 Genomic DNA. No translation available.
BC163087 mRNA. Translation: AAI63087.1.
BC163097 mRNA. Translation: AAI63097.1.
RefSeqiNP_001071098.2. NM_001077630.2.
UniGeneiDr.79126.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000066423.

Protein family/group databases

CAZyiGT68. Glycosyltransferase Family 68.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000066424; ENSDARP00000066423; ENSDARG00000045175.
GeneIDi777668.
KEGGidre:777668.

Organism-specific databases

CTDi23275.
ZFINiZDB-GENE-030131-3595. pofut2.

Phylogenomic databases

eggNOGiENOG410IFPR. Eukaryota.
ENOG410Y78N. LUCA.
GeneTreeiENSGT00390000007989.
HOGENOMiHOG000015874.
HOVERGENiHBG053367.
KOiK03691.
OMAiCSHARFF.
OrthoDBiEOG76T9S1.
PhylomeDBiB0S641.
TreeFamiTF314337.

Enzyme and pathway databases

ReactomeiR-DRE-5173214. O-glycosylation of TSR domain-containing proteins.

Family and domain databases

InterProiIPR019378. GDP-Fuc_O-FucTrfase.
[Graphical view]
PfamiPF10250. O-FucT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  2. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.
  3. Ensembl
    Submitted (AUG-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.

Entry informationi

Entry nameiB0S641_DANRE
AccessioniPrimary (citable) accession number: B0S641
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: June 8, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.