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B0RZP0 (B0RZP0_FINM2) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
B0RZP0 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: A5BFFF1C5ABC140A

FASTA39743,896
        10         20         30         40         50         60 
MSKAKFERTK PHVNIGTIGH VDHGKTTLTA AITLVLNKRM GSGEFVDYAN IDKAPEERER 

        70         80         90        100        110        120 
GITINTSHVE YETEKRHYAH VDCPGHADYV KNMITGAAQM DGAILVVSAA DGPMPQTREH 

       130        140        150        160        170        180 
ILLARQVGVP KIAVFLNKED QVDDPELIEL VEMEVRELLN EYEYEGDDTP IVVGSALKAL 

       190        200        210        220        230        240 
EDPDGEWGDK IMKLMEEVDE WIPAPVRDVD HPFLMPVEDI FTITGRGTVA TGRVERGKVK 

       250        260        270        280        290        300 
VGDNVEIVGL TTEKRTVVVT GVEMFRKQLD EAEAGDNIGA LLRGVQREEI ERGQVLAAPG 

       310        320        330        340        350        360 
TIHPHTKFEA EVYVLTKDEG GRHTPFFSGY RPQFYFRTTD VTGNIELEEG VEMVMPGDNA 

       370        380        390 
KFIIELITPI AIEEGLRFAI REGGRTVGAG VVSKIIA

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References

[1]"Complete genome sequence of Finegoldia magna, an anaerobic opportunistic pathogen."
Goto T., Yamashita A., Hirakawa H., Matsutani M., Todo K., Oshima K., Toh H., Miyamoto K., Kuhara S., Hattori M., Shimizu T., Akimoto S.
DNA Res. 15:39-47(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29328 EMBL BAG07499.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008971 Genomic DNA. Translation: BAG07499.1.
RefSeqYP_001691389.1. NC_010376.1.

3D structure databases

ProteinModelPortalB0RZP0.
SMRB0RZP0. Positions 2-396.
ModBaseSearch...

Protein-protein interaction databases

STRING334413.FMG_0081.
B0RZP0.

Proteomic databases

PRIDEB0RZP0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG07499; BAG07499; FMG_0081.
GeneID6019933.
KEGGfma:FMG_0081.
PATRIC21885715. VBIFinMag33027_0275.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAHTDFEAN.
ProtClustDBPRK00049.

Enzyme and pathway databases

BioCycFMAG334413:GJ6M-81-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RZP0_FINM2
AccessionPrimary (citable) accession number: B0RZP0
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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