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B0RYZ1 (B0RYZ1_XANCB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Exported alpha-glucuronidase EMBL CAP53677.1
EC=3.2.1.139 EMBL CAP53677.1
Gene names
Ordered Locus Names:xcc-b100_4307
OrganismXanthomonas campestris pv. campestris (strain B100) [Complete proteome] [HAMAP]
Taxonomic identifier509169 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length732 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CAP53677.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processxylan catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-glucuronidase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B0RYZ1 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 04CA9CAB84B3CB17

FASTA73280,821
        10         20         30         40         50         60 
MTRKFVRRTQ AACAHWLLLA LLVCSAVLPA MTAHAEDGYD LWLRYHLLPD AAQKQGSARE 

        70         80         90        100        110        120 
LVVLGATPTL QAASDELQRG LHGLLGVAPA LTQAATRDGA IVLGTAQTPQ IAALGLATQA 

       130        140        150        160        170        180 
LGREGYLIRS TRVDGHQATV IVGGSDVGVL YGAFHLLRLV QTGQSLSALD IRQTPRLQLR 

       190        200        210        220        230        240 
LLNHWDNLDG VVERGYAGAS LWNWQTLPGY LDPRYTDYAR ANASLGINGT VLNNVNAKAW 

       250        260        270        280        290        300 
SLTPQYLDKA AALATVFRPY GIRVFLSARF SAPIEIGGLK TADPLDPQVQ RWWRETADAI 

       310        320        330        340        350        360 
YARIPDFGGF LVKANSEGQP GPQDYGRSHA DGANLLADAL APHGGVVMWR AFVYSHEQPD 

       370        380        390        400        410        420 
DRAKQAYSEF LPLDGAFRDN VIVQVKNGAI DFQPREPFHP LFGAMRKTPL MPEFQITKEY 

       430        440        450        460        470        480 
LGFSTHVAYL GSLFSETLQA DTYARGKGST VAKTVDGSLF KATTRSPLTG IAGVANIGAD 

       490        500        510        520        530        540 
RNWSGSIFDQ ANWYAFGRLA WDPDLRPEAI AQEWVRMSFS NDSAVVTPVV DLLLRSREAV 

       550        560        570        580        590        600 
VNYMTPLGLH HLMGRGHHYG PAPWDAGSER PDWDPVYYHR ADHNGIGFDR SASGSNAAAQ 

       610        620        630        640        650        660 
YAAPVARVFG NVQRVPERYL LWFHHAPWDH RMASGRPLWD ELVWHYDHGV DEVQQMRATW 

       670        680        690        700        710        720 
QQLHGRIDAQ RYQQIAAFLA IQQDEAQWWR DASIAYFQQV SGRALPAGTA PPAHPLAYYQ 

       730 
ALKFPYAPGN PK

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References

[1]"The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A.
J. Biotechnol. 134:33-45(2008) [PubMed: 18304669] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM920689 Genomic DNA. Translation: CAP53677.1.
RefSeqYP_001905712.1. NC_010688.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB0RYZ1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6324072.
GenomeReviewsGene locus xcc-b100_4307 in contig AM920689_GR.
PATRIC24088633. VBIXanCam108527_4367.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG293196.
OMAHAEGANM.
ProtClustDBCLSK872917.

Enzyme and pathway databases

BioCycXCAM487884:XCC-B100_4307-MONOMER.

Family and domain databases

InterProIPR011395. Glyco_hydro_67_aGlcAse.
IPR005154. Glyco_hydro_67_aGlcAse_N.
IPR011099. Glyco_hydro_67_C.
IPR011100. Glyco_hydro_67_M.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.90.1330.10. Glyco_hydro_67_C. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF07477. Glyco_hydro_67C. 1 hit.
PF07488. Glyco_hydro_67M. 1 hit.
PF03648. Glyco_hydro_67N. 1 hit.
[Graphical view]
PIRSFPIRSF029900. Alpha-glucuronds. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0RYZ1_XANCB
AccessionPrimary (citable) accession number: B0RYZ1
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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