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Protein
Submitted name:

HrcC protein

Gene

hrcC

Organism
Xanthomonas campestris pv. campestris (strain B100)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciXCAM509169:GHW4-3130-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
HrcC proteinImported
Gene namesi
Name:hrcCImported
Ordered Locus Names:xcc-b100_3066Imported
OrganismiXanthomonas campestris pv. campestris (strain B100)Imported
Taxonomic identifieri509169 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000001188 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3434Sequence analysisAdd
BLAST
Chaini35 – 605571Sequence analysisPRO_5002754474Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini187 – 365179Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0RX63-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYACPPVHR HRRAPLAAAL LLGLLPLLPP HANAASVPWH SRSFKYVADR
60 70 80 90 100
KDLKEVLRDL SASQSITTWI SPEVTGTLSG KFEATPQKFL DDLSGTFGFV
110 120 130 140 150
WYYDGSVLRI WGANETKNAT LSLGAASTSA LRDALARMRL DDPRFPVRYD
160 170 180 190 200
ETAHLAVVSG PPGYVDTVAA IAKQVEQVAR QRDATEVQVF QLHYAQAADH
210 220 230 240 250
TTRIGGQDIQ VPGMASLLRN IYGVRGAPTA ALPGPGANFG RVQPIGGGSS
260 270 280 290 300
NTFGNSGQRQ SGGSGILGLP ASWFGAGSPS ERVPVSPPLP GSGNSANAPA
310 320 330 340 350
SVWPEMSQAR RDAPLAVDAG SGGELASDAP VIEADPRTNG ILIRDRPERM
360 370 380 390 400
AAYGTLIQQL DNRPKLLQID ATIIEIRDGA LQDLGVDWRF HSRRVDVQTG
410 420 430 440 450
DGRGGQLGYD GSLSGAAAAG AAAPLGGTLT AVLGDAGRYL MTRVSALEQT
460 470 480 490 500
NKAKIVSTPQ VATLDNVEAV MDHKQQAFVR VSGYASADLY NLSAGVSLRV
510 520 530 540 550
LPSVVPGSPN GQMRLDVRIE DGQLGANTVD GIPVITSSEI TTQAFVNEGQ
560 570 580 590 600
SLLIAGYASD TDQTDLNNVP GLSRIPLVGN LFKHRQQSGS RLQRLFLLTP

HIVSP
Length:605
Mass (Da):63,998
Last modified:May 20, 2008 - v1
Checksum:i61F2697294D7A959
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM920689 Genomic DNA. Translation: CAP52429.1.

Genome annotation databases

EnsemblBacteriaiCAP52429; CAP52429; xcc-b100_3066.
KEGGixca:xcc-b100_3066.
PATRICi24086054. VBIXanCam108527_3105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM920689 Genomic DNA. Translation: CAP52429.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAP52429; CAP52429; xcc-b100_3066.
KEGGixca:xcc-b100_3066.
PATRICi24086054. VBIXanCam108527_3105.

Phylogenomic databases

KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Enzyme and pathway databases

BioCyciXCAM509169:GHW4-3130-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
    Vorholter F.J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Ruckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puhler A.
    J. Biotechnol. 134:33-45(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B100Imported.

Entry informationi

Entry nameiB0RX63_XANCB
AccessioniPrimary (citable) accession number: B0RX63
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 16, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.