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B0RV82

- B0RV82_XANCB

UniProt

B0RV82 - B0RV82_XANCB

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Protein
Alpha-amylase
Gene
amyA, xcc-b100_3608
Organism
Xanthomonas campestris pv. campestris (strain B100)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciXCAM509169:GHW4-3691-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyAImported
Ordered Locus Names:xcc-b100_3608Imported
OrganismiXanthomonas campestris pv. campestris (strain B100)
Taxonomic identifieri509169 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001188: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi509169.xccb100_3608.

Structurei

3D structure databases

ProteinModelPortaliB0RV82.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
KOiK01176.
OMAiDLDPNNW.
OrthoDBiEOG6K6V4W.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B0RV82-1 [UniParc]FASTAAdd to Basket

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MHATSRPCPR TFWQRAHQLL LIALTLLLTT ASAQADVILH AFNWPYATVE    50
ARAKQIADAG YRKVLVAPAY RSEGSAWWAR YQPQDIRLID NPLGDTTAFA 100
RMVQALANNG VETYADVVFN HMANEAATRS DLNYPGSAVL AQYAANPGRY 150
DALRLFGTVQ SNFLSGSDFG PAQCISNYND AFQVRNYRIC GGGSDPGLPD 200
LLGNDWVVQQ QRAYLQALKG LGVTGFRVDA AKHMTFDHLN RVFDAGIRSG 250
VYVFGEVITG GGSGNGDYDQ FLAPYLQSTP HAAYDFPLFN AVRNAFGVGA 300
SMQQLVDPAS AGQALPGNRA VTFAVTHDIP NNAGFRYAIL DPVDETLAYA 350
YLLGRNGGVP MVYTDNNESG DNRWVNAYLR DDLRRMIGFH NGVQGSDMQV 400
LSSSACHILF RRGSLGIVGI NKCGNPVNTT VAMNGSVLFW NADYVDALGS 450
GTVVRISSGS YTFTLPARQA RMWRR 475
Length:475
Mass (Da):51,795
Last modified:April 8, 2008 - v1
Checksum:i6997EC7908721D20
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM920689 Genomic DNA. Translation: CAP52973.1.
RefSeqiYP_001905013.1. NC_010688.1.

Genome annotation databases

EnsemblBacteriaiCAP52973; CAP52973; xcc-b100_3608.
GeneIDi6323484.
KEGGixca:xccb100_3608.
PATRICi24087156. VBIXanCam108527_3639.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM920689 Genomic DNA. Translation: CAP52973.1 .
RefSeqi YP_001905013.1. NC_010688.1.

3D structure databases

ProteinModelPortali B0RV82.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 509169.xccb100_3608.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAP52973 ; CAP52973 ; xcc-b100_3608 .
GeneIDi 6323484.
KEGGi xca:xccb100_3608.
PATRICi 24087156. VBIXanCam108527_3639.

Phylogenomic databases

eggNOGi COG0366.
KOi K01176.
OMAi DLDPNNW.
OrthoDBi EOG6K6V4W.

Enzyme and pathway databases

BioCyci XCAM509169:GHW4-3691-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
    Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A.
    J. Biotechnol. 134:33-45(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B100Imported.

Entry informationi

Entry nameiB0RV82_XANCB
AccessioniPrimary (citable) accession number: B0RV82
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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