Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Alpha-amylase

Gene

amyA

Organism
Xanthomonas campestris pv. campestris (strain B100)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciXCAM509169:GHW4-3691-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyAImported
Ordered Locus Names:xcc-b100_3608Imported
OrganismiXanthomonas campestris pv. campestris (strain B100)Imported
Taxonomic identifieri509169 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001188 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi509169.xccb100_3608.

Structurei

3D structure databases

ProteinModelPortaliB0RV82.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
KOiK01176.
OMAiDLDPNNW.
OrthoDBiEOG6K6V4W.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B0RV82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHATSRPCPR TFWQRAHQLL LIALTLLLTT ASAQADVILH AFNWPYATVE
60 70 80 90 100
ARAKQIADAG YRKVLVAPAY RSEGSAWWAR YQPQDIRLID NPLGDTTAFA
110 120 130 140 150
RMVQALANNG VETYADVVFN HMANEAATRS DLNYPGSAVL AQYAANPGRY
160 170 180 190 200
DALRLFGTVQ SNFLSGSDFG PAQCISNYND AFQVRNYRIC GGGSDPGLPD
210 220 230 240 250
LLGNDWVVQQ QRAYLQALKG LGVTGFRVDA AKHMTFDHLN RVFDAGIRSG
260 270 280 290 300
VYVFGEVITG GGSGNGDYDQ FLAPYLQSTP HAAYDFPLFN AVRNAFGVGA
310 320 330 340 350
SMQQLVDPAS AGQALPGNRA VTFAVTHDIP NNAGFRYAIL DPVDETLAYA
360 370 380 390 400
YLLGRNGGVP MVYTDNNESG DNRWVNAYLR DDLRRMIGFH NGVQGSDMQV
410 420 430 440 450
LSSSACHILF RRGSLGIVGI NKCGNPVNTT VAMNGSVLFW NADYVDALGS
460 470
GTVVRISSGS YTFTLPARQA RMWRR
Length:475
Mass (Da):51,795
Last modified:April 7, 2008 - v1
Checksum:i6997EC7908721D20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM920689 Genomic DNA. Translation: CAP52973.1.
RefSeqiYP_001905013.1. NC_010688.1.

Genome annotation databases

EnsemblBacteriaiCAP52973; CAP52973; xcc-b100_3608.
GeneIDi6323484.
KEGGixca:xccb100_3608.
PATRICi24087156. VBIXanCam108527_3639.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM920689 Genomic DNA. Translation: CAP52973.1.
RefSeqiYP_001905013.1. NC_010688.1.

3D structure databases

ProteinModelPortaliB0RV82.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi509169.xccb100_3608.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAP52973; CAP52973; xcc-b100_3608.
GeneIDi6323484.
KEGGixca:xccb100_3608.
PATRICi24087156. VBIXanCam108527_3639.

Phylogenomic databases

eggNOGiCOG0366.
KOiK01176.
OMAiDLDPNNW.
OrthoDBiEOG6K6V4W.

Enzyme and pathway databases

BioCyciXCAM509169:GHW4-3691-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
    Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A.
    J. Biotechnol. 134:33-45(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B100Imported.

Entry informationi

Entry nameiB0RV82_XANCB
AccessioniPrimary (citable) accession number: B0RV82
Entry historyi
Integrated into UniProtKB/TrEMBL: April 7, 2008
Last sequence update: April 7, 2008
Last modified: January 6, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.