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B0RV82 (B0RV82_XANCB) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CAP52973.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B0RV82 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 6997EC7908721D20

FASTA47551,795
        10         20         30         40         50         60 
MHATSRPCPR TFWQRAHQLL LIALTLLLTT ASAQADVILH AFNWPYATVE ARAKQIADAG 

        70         80         90        100        110        120 
YRKVLVAPAY RSEGSAWWAR YQPQDIRLID NPLGDTTAFA RMVQALANNG VETYADVVFN 

       130        140        150        160        170        180 
HMANEAATRS DLNYPGSAVL AQYAANPGRY DALRLFGTVQ SNFLSGSDFG PAQCISNYND 

       190        200        210        220        230        240 
AFQVRNYRIC GGGSDPGLPD LLGNDWVVQQ QRAYLQALKG LGVTGFRVDA AKHMTFDHLN 

       250        260        270        280        290        300 
RVFDAGIRSG VYVFGEVITG GGSGNGDYDQ FLAPYLQSTP HAAYDFPLFN AVRNAFGVGA 

       310        320        330        340        350        360 
SMQQLVDPAS AGQALPGNRA VTFAVTHDIP NNAGFRYAIL DPVDETLAYA YLLGRNGGVP 

       370        380        390        400        410        420 
MVYTDNNESG DNRWVNAYLR DDLRRMIGFH NGVQGSDMQV LSSSACHILF RRGSLGIVGI 

       430        440        450        460        470 
NKCGNPVNTT VAMNGSVLFW NADYVDALGS GTVVRISSGS YTFTLPARQA RMWRR 

« Hide

References

[1]"The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A.
J. Biotechnol. 134:33-45(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B100 EMBL CAP52973.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM920689 Genomic DNA. Translation: CAP52973.1.
RefSeqYP_001905013.1. NC_010688.1.

3D structure databases

ProteinModelPortalB0RV82.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING509169.xccb100_3608.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAP52973; CAP52973; xcc-b100_3608.
GeneID6323484.
KEGGxca:xccb100_3608.
PATRIC24087156. VBIXanCam108527_3639.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
KOK01176.
OMADLDPNNW.
OrthoDBEOG6K6V4W.
ProtClustDBCLSK869574.

Enzyme and pathway databases

BioCycXCAM509169:GHW4-3691-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0RV82_XANCB
AccessionPrimary (citable) accession number: B0RV82
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: November 13, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)