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B0RV82

- B0RV82_XANCB

UniProt

B0RV82 - B0RV82_XANCB

Protein

Alpha-amylase

Gene

amyA

Organism
Xanthomonas campestris pv. campestris (strain B100)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (08 Apr 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciXCAM509169:GHW4-3691-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Name:amyAImported
    Ordered Locus Names:xcc-b100_3608Imported
    OrganismiXanthomonas campestris pv. campestris (strain B100)Imported
    Taxonomic identifieri509169 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000001188: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi509169.xccb100_3608.

    Structurei

    3D structure databases

    ProteinModelPortaliB0RV82.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    KOiK01176.
    OMAiDLDPNNW.
    OrthoDBiEOG6K6V4W.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B0RV82-1 [UniParc]FASTAAdd to Basket

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    MHATSRPCPR TFWQRAHQLL LIALTLLLTT ASAQADVILH AFNWPYATVE    50
    ARAKQIADAG YRKVLVAPAY RSEGSAWWAR YQPQDIRLID NPLGDTTAFA 100
    RMVQALANNG VETYADVVFN HMANEAATRS DLNYPGSAVL AQYAANPGRY 150
    DALRLFGTVQ SNFLSGSDFG PAQCISNYND AFQVRNYRIC GGGSDPGLPD 200
    LLGNDWVVQQ QRAYLQALKG LGVTGFRVDA AKHMTFDHLN RVFDAGIRSG 250
    VYVFGEVITG GGSGNGDYDQ FLAPYLQSTP HAAYDFPLFN AVRNAFGVGA 300
    SMQQLVDPAS AGQALPGNRA VTFAVTHDIP NNAGFRYAIL DPVDETLAYA 350
    YLLGRNGGVP MVYTDNNESG DNRWVNAYLR DDLRRMIGFH NGVQGSDMQV 400
    LSSSACHILF RRGSLGIVGI NKCGNPVNTT VAMNGSVLFW NADYVDALGS 450
    GTVVRISSGS YTFTLPARQA RMWRR 475
    Length:475
    Mass (Da):51,795
    Last modified:April 8, 2008 - v1
    Checksum:i6997EC7908721D20
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM920689 Genomic DNA. Translation: CAP52973.1.
    RefSeqiYP_001905013.1. NC_010688.1.

    Genome annotation databases

    EnsemblBacteriaiCAP52973; CAP52973; xcc-b100_3608.
    GeneIDi6323484.
    KEGGixca:xccb100_3608.
    PATRICi24087156. VBIXanCam108527_3639.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM920689 Genomic DNA. Translation: CAP52973.1 .
    RefSeqi YP_001905013.1. NC_010688.1.

    3D structure databases

    ProteinModelPortali B0RV82.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 509169.xccb100_3608.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAP52973 ; CAP52973 ; xcc-b100_3608 .
    GeneIDi 6323484.
    KEGGi xca:xccb100_3608.
    PATRICi 24087156. VBIXanCam108527_3639.

    Phylogenomic databases

    eggNOGi COG0366.
    KOi K01176.
    OMAi DLDPNNW.
    OrthoDBi EOG6K6V4W.

    Enzyme and pathway databases

    BioCyci XCAM509169:GHW4-3691-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
      Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A.
      J. Biotechnol. 134:33-45(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B100Imported.

    Entry informationi

    Entry nameiB0RV82_XANCB
    AccessioniPrimary (citable) accession number: B0RV82
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 8, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3