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B0RPI1 (B0RPI1_XANCB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.91 EMBL CAP50366.1
Gene names
Name:cel2 EMBL CAP50366.1
Ordered Locus Names:xcc-b100_1018
OrganismXanthomonas campestris pv. campestris (strain B100) [Complete proteome] [HAMAP]
Taxonomic identifier509169 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CAP50366.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcellulose catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncellulose 1,4-beta-cellobiosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B0RPI1 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 43DD5C169E61B6ED

FASTA48951,396
        10         20         30         40         50         60 
MGVVKNTPTA VWLDRIDAIA GGSKNAGRLG LRAHLDAALA QKKANTPITA SFVIYDLPGR 

        70         80         90        100        110        120 
DCHALASNGE LPLTPAALER YKKDYIDVIA GIFADPKYKD IRIVNVIEPD SLPNLVTNLN 

       130        140        150        160        170        180 
DMRCALANST GIYEAGIKYA IDKLHAIPNT YNYLDIGHSG WLGWDSNRGP TIALYTRVVQ 

       190        200        210        220        230        240 
GTAAGLSSVD GFVTNTANTT PLNEPNLPNP ELSVNGQPIK SAKYYEWNPY FDETDFTQAL 

       250        260        270        280        290        300 
YSGFVGAGWP GTIGFIIDTG RNGWGGPNRP TAAVGSDITT YVNSGRIDRR LHRGNWCNQS 

       310        320        330        340        350        360 
NAGIGMPPAA APGAHLDAYA WVKPPGESDG SSTLIPNNEG KGFDRMCDPT YTTADGVLSG 

       370        380        390        400        410        420 
AMPGAPISGA WFHNQFVALV NNAYPDIATA SAASVALPPR QVPAATRGLT ATVGDSTVKL 

       430        440        450        460        470        480 
SWSAVSGAAS YTVQRRAGTT GALTTVSSNV ISTAYVDRAV VNGAVYVVTA NNAAGASAPS 


ALVIARPNK 

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References

[1]"The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A.
J. Biotechnol. 134:33-45(2008) [PubMed: 18304669] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM920689 Genomic DNA. Translation: CAP50366.1.
RefSeqYP_001902424.1. NC_010688.1.

3D structure databases

ProteinModelPortalB0RPI1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0RPI1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6321337.
GenomeReviewsGene locus xcc-b100_1018 in contig AM920689_GR.
PATRIC24081885. VBIXanCam108527_1053.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG756137.
OMANAPISGH.
ProtClustDBCLSK539124.

Enzyme and pathway databases

BioCycXCAM487884:XCC-B100_1018-MONOMER.

Family and domain databases

InterProIPR016288. Beta_cellobiohydrolase.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:3.20.20.40. Glyco_hydro_6. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PfamPF01341. Glyco_hydro_6. 1 hit.
[Graphical view]
PIRSFPIRSF001100. Beta_cellobiohydrolase. 1 hit.
PRINTSPR00733. GLHYDRLASE6.
SMARTSM00060. FN3. 1 hit.
[Graphical view]
SUPFAMSSF49265. FN_III-like. 1 hit.
SSF51989. Glyco_hydro_6. 1 hit.
PROSITEPS50853. FN3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RPI1_XANCB
AccessionPrimary (citable) accession number: B0RPI1
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)