B0RNA4 (B0RNA4_XANCB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exported arabinogalactan endo-1,4-beta-galactosidase EMBL CAP49939.1
EC=3.2.1.89 EMBL CAP49939.1

Gene names

Name:	galA1 EMBL CAP49939.1
Ordered Locus Names:	xcc-b100_0604

Organism

Xanthomonas campestris pv. campestris (strain B100) [Complete proteome] [HAMAP]

Taxonomic identifier

509169 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	333 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAP49939.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	arabinogalactan endo-1,4-beta-galactosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro glucosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RNA4 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 663BFA16FABA092A	FASTA	333	36,884
	10 20 30 40 50 60 MRMFSTRHTR LLLILVLCMV SAGAGAQGLA KGADVSWINQ QAAANPPQVF QDASGKTTDF 70 80 90 100 110 120 IKLFKDVGGN AIRLRVWVNP QGGWNDGRDT LDKAKRAAAQ GMRIMIDFHY SDSWADPGKQ 130 140 150 160 170 180 TKPAAWASHS VAQLNTDVYK HTQGILKYLK DNGITVTWVQ VGNEINSGML WDQGKTPNFA 190 200 210 220 230 240 NLGQFINSGY NATKAVYPNA KVIVHLANGY DNANFRWFFD NLRSAGGKWD VIGMSHYPPV 250 260 270 280 290 300 GSWQDYNTRL ETNLRDMISR YGSDVIVAEV GMDWQQAATT RAMLGNLITR SNAIGSRMLG 310 320 330 IFYWEPNAYP GWQGYTMGAV DSNGRLTEAL QAF

References

[1]

"The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis." Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A. J. Biotechnol. 134:33-45(2008) [PubMed: 18304669] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM920689 Genomic DNA. Translation: CAP49939.1.
RefSeq	YP_001902009.1. NC_010688.1.
3D structure databases
ProteinModelPortal	B0RNA4.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RNA4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6321085.
GenomeReviews	Gene locus xcc-b100_0604 in contig AM920689_GR.
PATRIC	24081022. VBIXanCam108527_0623.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG465679.
OMA	IGMSLYP.
ProtClustDB	CLSK396415.
Enzyme and pathway databases
BioCyc	XCAM487884:XCC-B100_0604-MONOMER.
Family and domain databases
InterPro	IPR011683. Glyco_hydro_53. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF07745. Glyco_hydro_53. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0RNA4_XANCB

Accession

Primary (citable) accession number: B0RNA4

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)