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B0RLB1 (B0RLB1_XANCB) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL CAP49479.1
Gene names
Name:treS EMBL CAP49479.1
Ordered Locus Names:xcc-b100_0149 EMBL CAP49479.1
OrganismXanthomonas campestris pv. campestris (strain B100) [Complete proteome] [HAMAP]
Taxonomic identifier509169 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Protein attributes

Sequence length1116 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B0RLB1 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: ACD1E352D6E8E6F0

FASTA1,116125,628
        10         20         30         40         50         60 
MNAVPALQAD AEQSAVVADQ LWYKDAIIYQ VHVKSFFDSN DDGIGDFPGL ISKLDYIAEL 

        70         80         90        100        110        120 
GVDTIWLLPF YPSPRRDDGY DIAEYMAVHP DYGTIADFEQ LVAQAHARGI RIVTELVINH 

       130        140        150        160        170        180 
TSDQHPWFQR ARNAPEGSPE RDFYVWSDTD QEYEGTRIIF CDTEKSNWTW DPVAGQYFWH 

       190        200        210        220        230        240 
RFYSHQPDLN FDNPAVLESV LEVMRFWLDR GVDGLRLDAV PYLIERSGTS NENLPETHAI 

       250        260        270        280        290        300 
LRKIRATLDA EYPDRMLLAE ANMWPEDTQQ YFGQNADECH MAFHFPLMPR MYMAIAREDR 

       310        320        330        340        350        360 
FPITDIMRQT PEIPETCQWA IFLRNHDELT LEMVTDSERD YLWQTYASDR RARINLGIRR 

       370        380        390        400        410        420 
RLAPLLERDR RRIELMTSLL LTMPGTPVLY YGDEIGMGDN IHLGDRDGVR TPMQWSIDRN 

       430        440        450        460        470        480 
GGFSRADPAA LVLPPVMDPL YGFQAVNVEA QIRDQHSLLT WTRRVLSVRK RYQAFGRGTL 

       490        500        510        520        530        540 
RFLYPGNRRM LAYLRCYQDE TVLCVANLSH TLQAVELDLS EFEGRVPVDI IGGGSFPPIG 

       550        560        570        580        590        600 
RLTYLLTVPP FGFYAFQLVS EGTLPDWHVP SPVPLPDYRT LVLRSDTEES AALLPHLATL 

       610        620        630        640        650        660 
EGEILPAWLS ARRWFSAKDQ ALKSVRISRR TPLPGDEPMS LLELDVELED GHHECYMLPV 

       670        680        690        700        710        720 
GIVWEREHPS TLAEQLALAR VRQGREVGYL TDAFALKPMV RGVIDALRHD AALDFHDGDD 

       730        740        750        760        770        780 
ASQQGQVRFE STPALAALEI PDDPEIRWLS AEQSNSSLVV ADKAVFKLLR HVATGANPEI 

       790        800        810        820        830        840 
EIGRRLTEMG YANAAPLLGS VSRVDAQGTI TTIALLQGFI RNQGDAWRWT LDHLARSFDE 

       850        860        870        880        890        900 
YATAQTDEAR NEAVAGYDAF AAVVGKRLAE LHEALSRSTD DADFAPQRID LPTANDVVGG 

       910        920        930        940        950        960 
VARQVEEMWE TVHARLGATD DAAEREALES VLAERPQLDA LLARAPSVLA ESLLTRVHGD 

       970        980        990       1000       1010       1020 
FHLGQILVAF DDVVLIDFEG EPAKPLAERR AKASPLRDVA GFLRSLDYAS EVSARGEEGT 

      1030       1040       1050       1060       1070       1080 
AARAGVGVDA HLDDFLVEFR RRSTQSFLDA YHAVLDASAH PWIAPAAFNA ATLLFLVEKA 

      1090       1100       1110 
CYEVRYEAAN RPGWLMVPIQ GLRRILQRAR AGAGDT 

« Hide

References

[1]"The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis."
Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A.
J. Biotechnol. 134:33-45(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B100 EMBL CAP49479.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM920689 Genomic DNA. Translation: CAP49479.1.
RefSeqYP_001901555.1. NC_010688.1.

3D structure databases

ProteinModelPortalB0RLB1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING509169.xccb100_0149.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAP49479; CAP49479; xcc-b100_0149.
GeneID6320977.
KEGGxca:xccb100_0149.
PATRIC24080074. VBIXanCam108527_0152.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
KOK05343.
OMARDGTNNE.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2502804.

Enzyme and pathway databases

BioCycXCAM509169:GHW4-151-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0RLB1_XANCB
AccessionPrimary (citable) accession number: B0RLB1
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: November 13, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)