B0RIM5 (B0RIM5_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glycosyl transferase EMBL CAQ01516.1

Gene names

Ordered Locus Names:

CMS1405

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ01516.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	534 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Transferase EMBL CAQ01516.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	trehalose biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RIM5 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 269A6773FBB2BFE0	FASTA	534	59,112
	10 20 30 40 50 60 MTPPPSSTPS ATEPTTEPRT ADAHDGDVEP GAYDLVVVSN RLPVDRVVAA DGTTSWRHSP 70 80 90 100 110 120 GGLVTALEPV MRANEGAWVG WPGIADHDVE PFVDAGISII PVTLTEQDLA EYYEGFSNDT 130 140 150 160 170 180 LWPLYHDVIA QPSYHREWWD TYVTVNQRFA DAAAKAAAPG ATVWVQDYQL QLVPKMLREQ 190 200 210 220 230 240 RPDLTIGFFN HIPFPPYGIY SQLPWRTQII EGLLGADVIG FQRVADAGNF TRAVRRLFGY 250 260 270 280 290 300 TTRGSTVDVP VRGGIPLTVP GTKPSKPVRE LRTRQVVAKH YPISIDARSY EEMAKDPAIQ 310 320 330 340 350 360 ERARQIRADL GDPKTILLGV DRLDYTKGIG HRLKAFGELL AEGRVTVEDA TLVQVASPSR 370 380 390 400 410 420 ERVETYKQLR DEIELTVGRI NGDYGSISHT AISYLHHGYP REEMVALCLA ADVMLVTALR 430 440 450 460 470 480 DGMNLVAKEY VATKHSNEGV LVLSEFAGAA DELKAALLVN PHDIEGLKEA ILRAIEMPKA 490 500 510 520 530 EQRKRMRSLR KRVFENDVTA WSSSFLADLG RTHAASIHEG PDEEVVEPLM DEGW

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ01516.1.
RefSeq	YP_001710132.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RIM5.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RIM5.
Protein family/group databases
CAZy	GT20. Glycosyltransferase Family 20.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6157243.
GenomeReviews	Gene locus CMS1405 in contig AM849034_GR.
KEGG	cms:CMS_1405.
PATRIC	21459822. VBIClaMic4666_1468.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG559076.
OMA	EYGRKEM.
ProtClustDB	CLSK2764565.
Family and domain databases
InterPro	IPR001830. Glyco_trans_20. [Graphical view]
KO	K00697.
Pfam	PF00982. Glyco_transf_20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0RIM5_CLAMS

Accession

Primary (citable) accession number: B0RIM5

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)