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B0RIJ7 (B0RIJ7_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL CAQ01488.1
Gene names
Ordered Locus Names:CMS1377
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ01488.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length213 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue261N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
B0RIJ7 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 76F3129CC4494D62

FASTA21322,572
        10         20         30         40         50         60 
MQADVADGIR AAGRRPDEVT TIVVTKFQPV SLLRALVDLG VRDLGESRHQ EAQGKAAELE 

        70         80         90        100        110        120 
GSGVAWHFVG QLQGKKARQV RRYASVIHSV DRPSLIDALS SDEQETRVFL QVNLTADEGR 

       130        140        150        160        170        180 
GGVPPAEAEA LAEHAAAAPG IRVLGVMAVA PDDGEPRRAF ARLRGISDDV RRILPDARAI 

       190        200        210 
SAGMSGDLRE ALLEGATHLR IGSAITGKRP GGP

« Hide

References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM849034 Genomic DNA. Translation: CAQ01488.1.
RefSeqYP_001710104.1. NC_010407.1.

3D structure databases

ProteinModelPortalB0RIJ7.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0RIJ7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6158702.
GenomeReviewsGene locus CMS1377 in contig AM849034_GR.
KEGGcms:CMS_1377.
PATRIC21459761. VBIClaMic4666_1438.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG289671.
OMAHGSTMVR.
ProtClustDBCLSK831333.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
PROSITEPS01211. UPF0001. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RIJ7_CLAMS
AccessionPrimary (citable) accession number: B0RIJ7
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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