B0RIC5 (B0RIC5_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L10 HAMAP MF_00362

Gene names

Name:	rplJ HAMAP MF_00362
Ordered Locus Names:	CMS0115

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ00239.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	181 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L10P family. HAMAP MF_00362

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_00362 EMBL CAQ00239.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ribosome biogenesis Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RIC5 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 1CDB01C4B055451F	FASTA	181	19,229
	10 20 30 40 50 60 MSGNHVIRSA MANKEASVAE LAEKFRSSNA VLLTEYRGLT VAQLKQLRKS ISADATYAVV 70 80 90 100 110 120 KNTLTKIAAN QAGISSFDDE LVGPSAIAFV HGDTVAVAKA LRTFTKANPL LVVKGGYFDG 130 140 150 160 170 180 NPLTADEVNK LADLESREVL LGKLAGAFKA SLFGAAYLFN APLSQAVRTV EALREKQESA Q

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ00239.1.
RefSeq	YP_001708903.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RIC5.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RIC5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6156107.
GenomeReviews	Gene locus CMS0115 in contig AM849034_GR.
KEGG	cms:CMS_0115.
PATRIC	21457180. VBIClaMic4666_0166.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG597359.
OMA	GICKVTK.
ProtClustDB	PRK00099.
Family and domain databases
HAMAP	MF_00362. Ribosomal_L10. [Tree]
InterPro	IPR022973. Ribosomal_L10. IPR001790. Ribosomal_L10/acidic_P0. IPR002363. Ribosomal_L10_eubac_CS. [Graphical view]
KO	K02864.
PANTHER	PTHR11560:SF8. PTHR11560:SF8. 1 hit.
Pfam	PF00466. Ribosomal_L10. 1 hit. [Graphical view]
PROSITE	PS01109. RIBOSOMAL_L10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0RIC5_CLAMS

Accession

Primary (citable) accession number: B0RIC5

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)