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B0RI01 (B0RI01_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Uncharacterized protein EMBL CAQ01428.1
Gene names
Ordered Locus Names:CMS1316 EMBL CAQ01428.1
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ01428.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter ›

Protein attributes

Sequence length405 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B0RI01 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 75622CB1ABEC83F8

FASTA40541,608
        10         20         30         40         50         60 
MRGLTRAVAF RSVERPPFRP SRARPSALPS RARSPALPSG GAVLEIAAEV LDALADGRRL 

        70         80         90        100        110        120 
AVAWVTDVLG SAPRTAGTAM AVDDRGRVIG SISGGCVEGA VIEVATGVLD DGAPALTSFG 

       130        140        150        160        170        180 
VSDDDAFQVG LTCGGRIGVV VVEVAPAGDA RSPVPDAVRA ALEDARAGRA ASLALVLEGP 

       190        200        210        220        230        240 
AVGTWVTADA DPVGADPARR IRAELAARLA AGRSGTTEVD CADGPMRVLH LVAAPPPRLI 

       250        260        270        280        290        300 
VFGAVDFSAA LADAAALLGY RVTVCDARPA FATRARFPTA HEVVAEWPDE YLARTEVDAR 

       310        320        330        340        350        360 
TVICVLTHDD RFDVPLLVAA LRLPVAFVGA MGSRATDVRR RALLVEEGLT DTELARLRSP 

       370        380        390        400 
IGLDIGASTP QETAVSILAE VLAARAGTEG APLTTTTGPI HGETA

« Hide

References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., Brown S.E., Knudson D., Francis D., Parkhill P., Ishimaru C.
J. Bacteriol. 190:2150-2160(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33113 / JCM 9667.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM849034 Genomic DNA. Translation: CAQ01428.1.
RefSeqYP_001710045.1. NC_010407.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING31964.CMS_1316.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ01428; CAQ01428; CMS1316.
GeneID6157172.
KEGGcms:CMS_1316.
PATRIC21459642. VBIClaMic4666_1379.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1975.
KOK07402.
OMAGVTMVRT.
ProtClustDBCLSK2325315.

Enzyme and pathway databases

BioCycCMIC31964:GJBN-1325-MONOMER.

Family and domain databases

InterProIPR003777. XdhC_CoxI.
IPR027051. XdhC_Rossmann_dom.
[Graphical view]
PfamPF13478. XdhC_C. 1 hit.
PF02625. XdhC_CoxI. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RI01_CLAMS
AccessionPrimary (citable) accession number: B0RI01
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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