B0RHF5 (B0RHF5_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative prephenate dehydrogenase EMBL CAQ01372.1

Gene names

Ordered Locus Names:

CMS1256

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ01372.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tyrosine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro prephenate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: InterPro prephenate dehydrogenase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RHF5 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 3A01C0BA8BAEC4E5	FASTA	372	38,240
	10 20 30 40 50 60 MSEAAGAAAA TDTRVQGTVR IVGTGLLGTS IALGLRARGV DVVLADASPT TLRLAADMGA 70 80 90 100 110 120 GRIADISSAP DRPALVVVCV PPDVTARVVA AELAAHPDAL VTDVASVKAA PLAELRAMGA 130 140 150 160 170 180 DLSSYLGSHP LAGRERGGPV SATGDLFLGR PWVIAGHDGI TYSAGAPVEQ LILDLGAVPI 190 200 210 220 230 240 EMTAEEHDAS VALVSHVPQV VASLLASRLA DGDASALGLS GQGLRDTTRI ASSDAALWVQ 250 260 270 280 290 300 ILGANASRIV PILKALRTDL DEVIDALDDV DAQGARLRVA ERIHAGNAGV ARIPGKHGQD 310 320 330 340 350 360 RRFAAVTVMI DDRPGQLAAL ICDVGAADVS IEDLRLEHSQ GAQVGLVEIA VLPEARDRLV 370 ARLEERDWRI AG

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ01372.1.
RefSeq	YP_001709994.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RHF5.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RHF5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6158972.
GenomeReviews	Gene locus CMS1256 in contig AM849034_GR.
KEGG	cms:CMS_1256.
PATRIC	21459518. VBIClaMic4666_1318.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG544990.
OMA	FENAFYI.
ProtClustDB	PRK06545.
Family and domain databases
InterPro	IPR008927. 6-PGluconate_DH_C-like. IPR016040. NAD(P)-bd_dom. IPR003099. Prephen_DH. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K04517.
Pfam	PF02153. PDH. 1 hit. [Graphical view]
SUPFAM	SSF48179. 6DGDH_C_like. 1 hit.
PROSITE	PS51176. PDH_ADH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0RHF5_CLAMS

Accession

Primary (citable) accession number: B0RHF5

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)