B0RH67 (B0RH67_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptidyl-tRNA hydrolase HAMAP MF_00083
Short name=PTH HAMAP MF_00083
EC=3.1.1.29 HAMAP MF_00083

Gene names

Name:	pth HAMAP MF_00083
Ordered Locus Names:	CMS2463

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ02543.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	195 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00083
Catalytic activity	N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083
Subunit structure	Monomer By similarity. HAMAP MF_00083
Subcellular location	Cytoplasm By similarity HAMAP MF_00083.
Sequence similarities	Belongs to the PTH family. HAMAP MF_00083

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP MF_00083
Molecular function	Hydrolase HAMAP MF_00083 EMBL CAQ02543.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RH67 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 883E714015BB72A0	FASTA	195	20,661
	10 20 30 40 50 60 MDDRTLLVVG LGNPGPQYAG TRHNVGQMAL DVLADRMRAT FRSHRANAQV AEGRAVPGGP 70 80 90 100 110 120 KLILAKPNSF MNLSGGPVAN LLSYFSLEPA QLVVAHDELD IPFDSMKLKQ GGGHGGHNGI 130 140 150 160 170 180 RDIISSAGTG DFTRVRIGIG RPPGRQDAAD FVLKPFSSTE RQVLPNVLED AADAVEMIAS 190 EGLIAAQLRF HTAAS

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ02543.1.
RefSeq	YP_001711120.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RH67.
SMR	B0RH67. Positions 1-192.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RH67.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6158813.
GenomeReviews	Gene locus CMS2463 in contig AM849034_GR.
KEGG	cms:CMS_2463.
PATRIC	21461953. VBIClaMic4666_2519.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG610927.
OMA	IKFKTGG.
ProtClustDB	PRK05426.
Family and domain databases
HAMAP	MF_00083. Pept_tRNA_hydro_bact. [Tree]
InterPro	IPR001328. Pept_tRNA_hydro. IPR018171. Pept_tRNA_hydro_CS. [Graphical view]
Gene3D	G3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit.
KO	K01056.
PANTHER	PTHR17224. Pept_tRNA_hydro. 1 hit.
Pfam	PF01195. Pept_tRNA_hydro. 1 hit. [Graphical view]
SUPFAM	SSF53178. Pept_tRNA_hydro. 1 hit.
TIGRFAMs	TIGR00447. Pth. 1 hit.
PROSITE	PS01195. PEPT_TRNA_HYDROL_1. 1 hit. PS01196. PEPT_TRNA_HYDROL_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0RH67_CLAMS

Accession

Primary (citable) accession number: B0RH67

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)