B0RFL2 (B0RFL2_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative secreted glycosyl hydrolase EMBL CAQ01074.1

Gene names

Ordered Locus Names:

CMS0960

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ01074.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	656 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL CAQ01074.1
Molecular function	Hydrolase EMBL CAQ01074.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 46	46	Potential EMBL CAQ01074.1
	Chain	47 – 656	610	Potential EMBL CAQ01074.1		PRO_5000307541

Sequences

	Sequence		Length	Mass (Da)
	B0RFL2 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 8F4A116049B54740	FASTA	656	69,936
	10 20 30 40 50 60 MSRRARRSPF RPALLAVLVA GALGAVPLPS AVATPGSAAP VVTATATAAT RQMERLGRAP 70 80 90 100 110 120 EAALVPNGVH LSWRMLGTDP DAIAFTVYRD GIRITPTPLT SANDLTDPNG RPTSHYEVRS 130 140 150 160 170 180 VVGGVEARVT GSFGVRTAPY TSVPLDRPSG GVTPAGERYE YSANDTSVGD ADGDGTYELF 190 200 210 220 230 240 VKWDPSDSKD NGQAGYTGPV LLDAYRMDGT RLWRIALGPN VRAGAHYTQF QVYDYDGDGR 250 260 270 280 290 300 AEVVMKTADG TVDGRGTVIR DGRADHRNAR GYVLSGAEYL TVFSGLTGAA IDTVPYDPPR 310 320 330 340 350 360 GDVASWGDSY GNRVDRFLAA TAYLDGSHPS IVMTRGYYAR TALAAYDFDG RHLVQRWLLD 370 380 390 400 410 420 SSTPGNAAAA GEGNHNLAVA DVDGDGRDEI LFGSMTVDDD GHLLYSTKLG HGDAIHVGDL 430 440 450 460 470 480 VPGNPGLEAF AVHEIMGQSG NRAATMRDAA TGRILWSIPG NQDTGFGLTA DVDPRYPGSE 490 500 510 520 530 540 SWAYGAGPDG KPQAQLRAAD GRLITDAIPD SRFAVFWDGD LLREQLGGAF DPASAAAVPV 550 560 570 580 590 600 ISKWNWTTRN RDVLLTATGA LTDNSTKVNP MLQADLLGDW REEVVVRSAD SHELRIYSTT 610 620 630 640 650 DPTSTRLRTF MQDPTYRLGV AWQNTGYNMP PQPSYFVGAG MGTPPVPRIR LAGPGS

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ01074.1.
RefSeq	YP_001709705.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RFL2.
SMR	B0RFL2. Positions 49-651.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RFL2.
Protein family/group databases
CAZy	PL11. Polysaccharide Lyase Family 11.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6156867.
GenomeReviews	Gene locus CMS0960 in contig AM849034_GR.
KEGG	cms:CMS_0960.
PATRIC	21458928. VBIClaMic4666_1025.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG425203.
OMA	WRIDLGR.
ProtClustDB	CLSK728422.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

B0RFL2_CLAMS

Accession

Primary (citable) accession number: B0RFL2

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)