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B0RFJ3 (B0RFJ3_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL CAQ01053.1
Gene names
Ordered Locus Names:CMS0938
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ01053.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length334 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B0RFJ3 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: CE9DD7852D9AED69

FASTA33436,907
        10         20         30         40         50         60 
MALRLPDKWI WDSWYVQEGG VTHAFYLHAS RALGDPDRRH HHPIVGHAVS RDLVSWTVLE 

        70         80         90        100        110        120 
DAIIVSEPGA FDDGTTWTGS VVRADDGLWW MFYTGTTLAE GMLVQRIGAA TSTDLVTWAK 

       130        140        150        160        170        180 
VSREPLVEAD PRWYEQLDLD AWHDQAWRDP WVQRLPGAST WHMLVTARAA TGDPRERGVL 

       190        200        210        220        230        240 
GHATSEDLVD WTVHPPLSAP GQGFGQLEVF QHEVVDGVPV LLFCCARSEL GHERQAAGEA 

       250        260        270        280        290        300 
GGVYSVVVDA RLTDVDFRRA RLFPRTDLYA SRLVRDTAGG WVLLAFVNEV DGRFIGELSD 

       310        320        330 
PVPVTADPRE GLVPRGAHPI AVSADTREEA GVPS

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References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM849034 Genomic DNA. Translation: CAQ01053.1.
RefSeqYP_001709687.1. NC_010407.1.

3D structure databases

ProteinModelPortalB0RFJ3.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0RFJ3.

Protein family/group databases

CAZyGH32. Glycoside Hydrolase Family 32.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6156847.
GenomeReviewsGene locus CMS0938 in contig AM849034_GR.
KEGGcms:CMS_0938.
PATRIC21458880. VBIClaMic4666_1001.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG418187.
OMAHMLVTAR.
ProtClustDBCLSK961033.

Family and domain databases

InterProIPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK01193.
PfamPF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SUPFAMSSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0RFJ3_CLAMS
AccessionPrimary (citable) accession number: B0RFJ3
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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