Skip Header

Contribute Send feedback
Read comments (?) or add your own

B0RFB2 (B0RFB2_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258
Gene names
Name:racE EMBL CAQ02197.1
Synonyms:murI HAMAP MF_00258
Ordered Locus Names:CMS2101
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ02197.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length294 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942

Catalytic activity

L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942

Sequence similarities

Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Sequences

Sequence LengthMass (Da)Tools
B0RFB2 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 1C953A29ADB123F0

FASTA29430,917
        10         20         30         40         50         60 
MSDAPIGIFD SGVGGLTVAR AVAALLPRES IIYIGDTAHT PYGDKPIADV RRYALAVLDD 

        70         80         90        100        110        120 
LVERGVKMLV IACNTASAAM LRDARERYDI PVVEVIQPAV RTAVSVTRNH RVGVIATHAT 

       130        140        150        160        170        180 
VTSRAYDDAF AAAPHLALTS AEAPDFVGFV ERGETSGPEL MSAAEGYLAP LRAAGVDTLV 

       190        200        210        220        230        240 
LGCTHYPFLE GAISLIMGPD VTLVSSDTET AKDVYRELVS AGLERRSDAP PVIRYEATGG 

       250        260        270        280        290 
SASDFETLAH RMLGSGVTHV ELVETGAITL PRRPRPDAAT PPDADGTPST PDPS

« Hide

References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM849034 Genomic DNA. Translation: CAQ02197.1.
RefSeqYP_001710788.1. NC_010407.1.

3D structure databases

ProteinModelPortalB0RFB2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0RFB2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6158944.
GenomeReviewsGene locus CMS2101 in contig AM849034_GR.
KEGGcms:CMS_2101.
PATRIC21461249. VBIClaMic4666_2167.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG645102.
OMAPQEDTIY.
ProtClustDBPRK00865.

Family and domain databases

HAMAPMF_00258. Glu_racemase.
[Tree]
InterProIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
Gene3DG3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KOK01776.
PANTHERPTHR21198. PTHR21198. 1 hit.
PfamPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMSSF53681. Asp/Glu_race. 2 hits.
TIGRFAMsTIGR00067. Glut_race. 1 hit.
PROSITEPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RFB2_CLAMS
AccessionPrimary (citable) accession number: B0RFB2
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info