B0REP4 (RS2_CLAMS) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S2

Gene names

Name:	rpsB
Ordered Locus Names:	CMS0771

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP]

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	320 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 320	320	30S ribosomal protein S2 HAMAP MF_00291_B		PRO_1000078872

Sequences

	Sequence		Length	Mass (Da)
	B0REP4 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 387999EBBDEEC0EE	FASTA	320	35,328
	10 20 30 40 50 60 MAVVTIRQLL DCGVHFGHPK TRWNPKMKRF IFTERSGIYI IDLQQSLALI DKAYDFVKET 70 80 90 100 110 120 VAHGGTILFV GTKKQAQESI AEQAQRVGQP YVNQRWLGGL LTNFQTVHKR LNRLKELDLV 130 140 150 160 170 180 DFDDTTRGFT KKELLIQRRE RDKLEKSLGG IRNLTKTPSA MWVVDTKKEH LAIDEARKLG 190 200 210 220 230 240 IPVIGILDTN CDPDEVQYPI PGNDDAIRSV ALLTRIIADA AAEGLIQRHQ KPDAEGSAPA 250 260 270 280 290 300 EPLADWEREL LEQGDAAKAA LPVEENDVDA EVSAKNEAKS DDEVPAPVHA PESDDATEAK 310 320 IEAEATEAEA APATTGPVSE

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33113 / JCM 9667.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ00891.1.
RefSeq	YP_001709534.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0REP4.
ModBase	Search...
Protein-protein interaction databases
STRING	B0REP4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6156695.
GenomeReviews	Gene locus CMS0771 in contig AM849034_GR.
KEGG	cms:CMS_0771.
PATRIC	21458544. VBIClaMic4666_0833.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG736296.
OMA	KQAQDSV.
ProtClustDB	PRK05299.
Enzyme and pathway databases
BioCyc	CMIC31964:CMS0771-MONOMER.
Family and domain databases
HAMAP	MF_00291_B. Ribosomal_S2_B. [Tree]
InterPro	IPR001865. Ribosomal_S2. IPR005706. Ribosomal_S2_bac/mit/plastid. IPR018130. Ribosomal_S2_CS. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02967.
PANTHER	PTHR12534. Ribosom_S2_bac. 1 hit.
Pfam	PF00318. Ribosomal_S2. 1 hit. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01011. RpsB_bact. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. PS00963. RIBOSOMAL_S2_2. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS2_CLAMS

Accession

Primary (citable) accession number: B0REP4

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	April 8, 2008
Last modified:	January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program