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B0REI4 (B0REI4_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transaldolase HAMAP MF_00493
EC=2.2.1.2 HAMAP MF_00493
Gene names
Name:tal HAMAP MF_00493
Ordered Locus Names:CMS1979
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ02076.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length371 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway By similarity. HAMAP MF_00493

Catalytic activity

Sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate. HAMAP MF_00493

Pathway

Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3. HAMAP MF_00493

Subcellular location

Cytoplasm By similarity HAMAP MF_00493.

Sequence similarities

Belongs to the transaldolase family. Type 2 subfamily. HAMAP MF_00493

Ontologies

Keywords
   Biological processPentose shunt HAMAP MF_00493
   Cellular componentCytoplasm HAMAP MF_00493
   Molecular functionTransferase HAMAP MF_00493 EMBL CAQ02076.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpentose-phosphate shunt

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionsedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1431 By similarity HAMAP MF_00493

Sequences

Sequence LengthMass (Da)Tools
B0REI4 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: F8DCE6F6530E557F

FASTA37139,851
        10         20         30         40         50         60 
MTDTTSPTAQ LSAAGVSIWL DDLSRERIDA KGIEKVIAER DVVGITTNPT IFASALAKGE 

        70         80         90        100        110        120 
AYDAQVRELA ADGADVDRAV FEITTRDVGE AARIFRPVYD RTVGFDGRVS IEVSPDFAND 

       130        140        150        160        170        180 
TQATIDEAHK LWDKISEPNV MIKIPATREG LEAITEVIGA GISVNVTLIF SLERYREVIN 

       190        200        210        220        230        240 
AYLTGLEKAK AAGIDLSTIH SVASFFVSRV DTEIDKRLDA IGTEEATALK SKAGVANAQL 

       250        260        270        280        290        300 
AYQAFEQSFA SERAQGLLGA GANKQRPLWA STGVKSPDLP DTLYVTQLVA ADVVNTMPEK 

       310        320        330        340        350        360 
TLDATFDHGV IEGDTITGSY DAANEVLNAV DGLGISYKEV TELLEKEGVE KFKVSWSELI 

       370 
ETVTTALDGA K

« Hide

References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM849034 Genomic DNA. Translation: CAQ02076.1.
RefSeqYP_001710672.1. NC_010407.1.

3D structure databases

ProteinModelPortalB0REI4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0REI4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6159019.
GenomeReviewsGene locus CMS1979 in contig AM849034_GR.
KEGGcms:CMS_1979.
PATRIC21460995. VBIClaMic4666_2042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG321149.
OMAMPEKTLD.
ProtClustDBPRK03343.

Family and domain databases

HAMAPMF_00493. Transaldolase_2.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR001585. Transaldolase.
IPR004732. Transaldolase_2.
IPR018225. Transaldolase_AS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK00616.
PANTHERPTHR10683. Transaldolase. 1 hit.
PfamPF00923. Transaldolase. 1 hit.
[Graphical view]
PIRSFPIRSF036915. Trnald_Bac_Plnt. 1 hit.
TIGRFAMsTIGR00876. Tal_mycobact. 1 hit.
PROSITEPS01054. TRANSALDOLASE_1. 1 hit.
PS00958. TRANSALDOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0REI4_CLAMS
AccessionPrimary (citable) accession number: B0REI4
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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