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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei161 – 1611UniRule annotation
Active sitei567 – 5671UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciCMIC31964:GJBN-1947-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:CMS1939Imported
OrganismiClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum)Imported
Taxonomic identifieri31964 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeClavibacter
ProteomesiUP000001318: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi31964.CMS_1939.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
KOiK01595.
OMAiFTSNWEL.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0REE4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTPPKKPLP LEHDSTRDGT RDAVEPALRS DVSHLGGLLG QVLRESGGED
60 70 80 90 100
LLRDVERLRE LVIDAYESAR DASIDDAERL VATFTPERAE QVARAFTCYF
110 120 130 140 150
HLANLAEEHH RVRVLREREA AAGFVPDSIP DAVGTLTEEL GREEAMRRLG
160 170 180 190 200
EMRFHPVLTA HPTEARRRAV ATGIRRIGDL LTERDGAMAG TLTGADIDRR
210 220 230 240 250
LLEEIDGLWR TSPLRTTRPT PLDEVRTAMG VFDQTLFEVV PRVYRLLDDW
260 270 280 290 300
LLGEEAGVRD AVAPAFFRLG NWIAADRDGN PYVTAAVTEE AAGIASEHIL
310 320 330 340 350
LGLERVALRV GRSLTLGDAD TPPSPELREL AAAQDALAPH LTARIGTRAP
360 370 380 390 400
AELHRRVLLV IAGRLAATRE RHDDPIAYPS AAELLADLRV LQGSLRSAGA
410 420 430 440 450
HRIAGGELQG LIWQAETFGF HLAEMEVRQH SQVHREALRE VLAVAAADAS
460 470 480 490 500
GDAVPELAPM TVEVLYVFRA LARLQERHGV APFCRFIVSF TQSADDIRTV
510 520 530 540 550
HELAALALGS AEDAPVLDVI PLFETFADLN ASTEILDGMI RLPQVAARLE
560 570 580 590 600
QTGRKLEVML GYSDSSKDVG PVSATFALFD AQARIAAWAR ENDIELTLFH
610 620 630 640 650
GRGGALGRGG GPADRAVRAQ PPGSVDGRFK LTEQGEVIFA HYGDKRIAAR
660 670 680 690 700
HIEQMAAATL LASAPSNEER NAAAAQGSAE MVRTMDEASR ARFFELVKAP
710 720 730 740 750
GFAPWFTQVT PMEEIGLLAL GSRPARRGLS VESLEDLRAI PWVFAWTQAR
760 770 780 790 800
INLTGWFGLG SALAAVGDEA VLRKAYDEWP LFTSMIDNVE MSLAKTDGRL
810 820 830 840 850
AERYLALGDR PDLAALVTEE MELTREWVRK ATGRGDILEG RPVLRRAVRL
860 870 880 890 900
RSPYVDALSL LQLRALRALR TTASAATGQA APGQADPTDP DHRLLLLTVN
910
GIAAGLQNTG
Length:910
Mass (Da):99,150
Last modified:April 8, 2008 - v1
Checksum:i69668577C945F33E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM849034 Genomic DNA. Translation: CAQ02036.1.
RefSeqiWP_012299267.1. NC_010407.1.
YP_001710632.1. NC_010407.1.

Genome annotation databases

EnsemblBacteriaiCAQ02036; CAQ02036; CMS1939.
GeneIDi6157649.
KEGGicms:CMS_1939.
PATRICi21460918. VBIClaMic4666_2004.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM849034 Genomic DNA. Translation: CAQ02036.1.
RefSeqiWP_012299267.1. NC_010407.1.
YP_001710632.1. NC_010407.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi31964.CMS_1939.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ02036; CAQ02036; CMS1939.
GeneIDi6157649.
KEGGicms:CMS_1939.
PATRICi21460918. VBIClaMic4666_2004.

Phylogenomic databases

eggNOGiCOG2352.
KOiK01595.
OMAiFTSNWEL.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciCMIC31964:GJBN-1947-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
    Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
    J. Bacteriol. 190:2150-2160(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1Imported.

Entry informationi

Entry nameiB0REE4_CLAMS
AccessioniPrimary (citable) accession number: B0REE4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: February 4, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.