B0RE55 (B0RE55_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinyl-diaminopimelate desuccinylase EMBL CAQ02017.1
EC=3.5.1.18 EMBL CAQ02017.1

Gene names

Name:	dapE EMBL CAQ02017.1
Ordered Locus Names:	CMS1915 EMBL CAQ02017.1

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ02017.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter › Clavibacter michiganensis

Protein attributes

Sequence length	368 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL CAQ02017.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	lysine biosynthetic process via diaminopimelate Inferred from electronic annotation. Source: InterPro
Molecular_function	succinyl-diaminopimelate desuccinylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RE55 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: A1F0CB2D9172BC81	FASTA	368	39,682
	10 20 30 40 50 60 MIRMPTETPP VPELDLTAGS VEVTRAICDI ESVSGDEATL ADAIERALAG CAHLELERDG 70 80 90 100 110 120 DAVVARTRLG RDRRVVIAGH IDTVPLNRNL PTRTEHDDGV EFLWGRGTVD MKAGVAVQLV 130 140 150 160 170 180 LAAELADPAY DITWIWYDHE EVSDSLNGLG RLARTRPELL EGDFAILGEP TRAEIEGGCN 190 200 210 220 230 240 GNLRVEVRAF GKRSHSARSW VGENAIHRIA PVLDVLAAYE AREVEVDGLV YREGLNAVGV 250 260 270 280 290 300 SGGIAGNVIP DEAMVHVNYR FAPSRSGAEA VEHVRGLFPG FEVTVVDLAE GARPGLDAEI 310 320 330 340 350 360 AQPFLAAVGG EARPKYGWTD VARFSALGIP AVNYGPGDPL LAHHDDERVD VTQIVSCERG LRAWLTAR

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., Brown S.E., Knudson D., Francis D., Parkhill P., Ishimaru C. J. Bacteriol. 190:2150-2160(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33113 / JCM 9667.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ02017.1.
RefSeq	YP_001710613.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RE55.
ModBase	Search...
Protein-protein interaction databases
STRING	31964.CMS_1915.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAQ02017; CAQ02017; CMS1915.
GeneID	6157640.
KEGG	cms:CMS_1915.
PATRIC	21460882. VBIClaMic4666_1986.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0624.
KO	K01439.
OMA	CQGTMRV.
ProtClustDB	PRK13007.
Enzyme and pathway databases
BioCyc	CMIC31964:GJBN-1928-MONOMER.
Family and domain databases
InterPro	IPR002933. Peptidase_M20. IPR011650. Peptidase_M20_dimer. IPR010174. Succinyl-DAP_deSuclase_DapE. [Graphical view]
Pfam	PF07687. M20_dimer. 1 hit. PF01546. Peptidase_M20. 1 hit. [Graphical view]
SUPFAM	SSF55031. Peptidase_M20_dimer. 1 hit.
TIGRFAMs	TIGR01900. dapE-gram_pos. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0RE55_CLAMS

Accession

Primary (citable) accession number: B0RE55

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)