B0RDL9 (B0RDL9_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Putative phenylalanine aminotransferase HAMAP MF_01513
EC=2.6.1.- HAMAP MF_01513

Gene names

Name:	pat HAMAP MF_01513 EMBL CAQ03148.1
Ordered Locus Names:	CMS3080

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ03148.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	371 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May catalyze the transamination reaction in phenylalanine biosynthesis By similarity. HAMAP MF_01513
Cofactor	Pyridoxal phosphate By similarity. HAMAP MF_01513
Sequence similarities	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. HAMAP MF_01513

Ontologies

Keywords
Ligand	Pyridoxal phosphate HAMAP MF_01513
Molecular function	Aminotransferase HAMAP MF_01513 EMBL CAQ03148.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	histidine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	histidinol-phosphate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RDL9 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 2285FB9C88D9C897	FASTA	371	39,349
	10 20 30 40 50 60 MIPEPAPLDD AAPVRLRPAI AAMVAYRQGK PAGEDDFKLS SNENPFEPLP SVLAALDAVR 70 80 90 100 110 120 DVNRYPDAGA TLLRTALAER FGVTVDHVHA GAGSVAILSQ LITAAAGPGD EVVHAWRSFE 130 140 150 160 170 180 AYPTLITVAG ATGVPVPNLP DHSHDVDGMI AALTDRTRVV IVCTPNNPTG TLVTEADLER 190 200 210 220 230 240 LLAAVPRDVL VLLDEAYGEF VGKEHALDGM RLVADHPNLV VLRTFSKAYG LAGLRIGYAV 250 260 270 280 290 300 GHPRILDAAR SAAIPLSVTG HAQHAALASL EHEDELLERV AVLARDRDEA WRALTEQGWD 310 320 330 340 350 360 VPRPHGNFVW LATGTETAEV EAQLAAAGLV VRAFAGEGIR VTIGEPASVR KLLKASAEIV 370 QGLPEGHPAR R

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ03148.1.
RefSeq	YP_001711702.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RDL9.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RDL9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6158853.
GenomeReviews	Gene locus CMS3080 in contig AM849034_GR.
KEGG	cms:CMS_3080.
PATRIC	21463173. VBIClaMic4666_3119.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG646350.
OMA	NNTKIVW.
ProtClustDB	PRK03321.
Family and domain databases
HAMAP	MF_01023. HisC_aminotrans_2. [Tree] MF_01513. Phe_aminotrans_2. [Tree]
InterPro	IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR024892. AroT. IPR005861. HisP_aminotrans. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00817.
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0RDL9_CLAMS

Accession

Primary (citable) accession number: B0RDL9

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)