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B0RD43 (B0RD43_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CMS0523
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ00642.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeClavibacter

Protein attributes

Sequence length539 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
B0RD43 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 8902D387309F8862

FASTA53955,570
        10         20         30         40         50         60 
MSVLFRRAEV ADLPALMHLE TTTFVSDAWS ADAMRGELTA RHGWYVVAVD EADGAILGYA 

        70         80         90        100        110        120 
GLSCPRGAHA ADVQTIAVAD GSRGRGIGRA LLTRLVAEAH ARGAREVLLE VRADNPVAQA 

       130        140        150        160        170        180 
LYASLGFEAI AVRPHYYQPD DVDAVVMRAA LAATPPAVAE PRDAPAERAG STVPHAPAHA 

       190        200        210        220        230        240 
DGDAAPDAGP LVLGIETSCD ETGIGIVRGQ TLLANVISSS MDEHARYGGV VPEVAARAHL 

       250        260        270        280        290        300 
EALTPAIDAA LAEAGVALRD LDAVAVTAGP GLSGALMVGV GAAKALAVAL DIPLHGVNHL 

       310        320        330        340        350        360 
VGHVGADLLS TDGRPGVPLE TPSIALLVSG GHTSLLLVRD LVDDVELLGE TIDDAAGEAF 

       370        380        390        400        410        420 
DKVARVLGLP YPGGPHIDRV AADGDPKAIR FPRGLSLPKD MERHRYDFSF SGLKTAVARW 

       430        440        450        460        470        480 
VEKRQDAGEP VPVADVAASF REAVVDVLLT KAVAACVDHG IPRLLLGGGV VANARVRELA 

       490        500        510        520        530 
AERCRAAGIE LRIPPLSLCT DNGAMIAALG ARLIESGRAP SGLAFGADST LPVTVVQVD 

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References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM849034 Genomic DNA. Translation: CAQ00642.1.
RefSeqYP_001709294.1. NC_010407.1.

3D structure databases

ProteinModelPortalB0RD43.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0RD43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6156481.
GenomeReviewsGene locus CMS0523 in contig AM849034_GR.
KEGGcms:CMS_0523.
PATRIC21458027. VBIClaMic4666_0582.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304663.
OMAPLYGVNH.
ProtClustDBCLSK2325483.

Family and domain databases

HAMAPMF_01445. gcp.
[Tree]
InterProIPR000182. AcTrfase_GCN5-related_dom.
IPR016181. Acyl_CoA_acyltransferase.
IPR022450. Pept_M22_O-sialoglycopept.
IPR000905. Peptidase_M22.
IPR017861. Peptidase_M22_subgr.
IPR006464. Rbsml_AcTrfase.
[Graphical view]
Gene3DG3DSA:3.40.630.30. Acyl_CoA_acyltransferase. 1 hit.
KOK01409.
PfamPF00583. Acetyltransf_1. 1 hit.
PF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSPR00789. OSIALOPTASE.
SUPFAMSSF55729. Acyl_CoA_acyltransferase. 1 hit.
TIGRFAMsTIGR03723. Bact_gcp. 1 hit.
TIGR00329. Gcp_kae1. 1 hit.
TIGR01575. RimI. 1 hit.
PROSITEPS51186. GNAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RD43_CLAMS
AccessionPrimary (citable) accession number: B0RD43
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)