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B0RCY4 (B0RCY4_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0234 protein CMS3006 HAMAP MF_00632
Gene names
Ordered Locus Names:CMS3006
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ03076.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length165 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0234 family. HAMAP MF_00632

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B0RCY4 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: B32700E745F00FB1

FASTA16518,566
        10         20         30         40         50         60 
MVRMADSSFD VVSKVDRMEA DNAVHQTQKE VEQRYDFKNV GASIEWSGDT ILMKASSEER 

        70         80         90        100        110        120 
VKAILDVLQT KMFKRGIGLK SLEEGEPFAS GKEYRIEVTL KQGIDQANAK KLGKIIRDEG 

       130        140        150        160 
PKSIKSRVEG DELRVSSKSR DDLQQTIALL KGADVDLDLQ FVNFR

« Hide

References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM849034 Genomic DNA. Translation: CAQ03076.1.
RefSeqYP_001711632.1. NC_010407.1.

3D structure databases

ProteinModelPortalB0RCY4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0RCY4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6159067.
GenomeReviewsGene locus CMS3006 in contig AM849034_GR.
KEGGcms:CMS_3006.
PATRIC21463035. VBIClaMic4666_3051.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG290634.
OMALQFTNYR.
ProtClustDBCLSK2325537.

Family and domain databases

HAMAPMF_00632. UPF0234.
[Tree]
InterProIPR007551. DUF520.
[Graphical view]
KOK09767.
PfamPF04461. DUF520. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RCY4_CLAMS
AccessionPrimary (citable) accession number: B0RCY4
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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