B0RCN2 (B0RCN2_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative xylosidase/arabinosidase EMBL CAQ01800.1

Gene names

Ordered Locus Names:

CMS1691

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ01800.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	548 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RCN2 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: DF694A811F1BDA9C	FASTA	548	60,082
	10 20 30 40 50 60 MKTPIIIAWS PTLSTFRNPV LTGLNPDPSV CAVGEEFFLV TSSFAYWPAI PVHRSRDLVN 70 80 90 100 110 120 WEPIGHVLDR PEQIDLSGLD MSDGIWAPTI RHHDGVFYVV STVARERRGS MNFVTTARNA 130 140 150 160 170 180 AGPWSQPVIL DAEGIDPSLF FDDDGRCWFS ACRDAEDPDR RGPAELYLQE LDLESLQLIG 190 200 210 220 230 240 PLHVLWNGAI AGAWAEAPHI YKHDGVYHLI AAEGGTERNH AVTAARSETI TGPYRTDPRS 250 260 270 280 290 300 PLLTHRHLGR HAPIQDVGHA DVVETPTGET WALVLGTRPV DGAHTLGREV FLVPAEWTDA 310 320 330 340 350 360 GLLLAPGHGR VAEVERRPTD ALGDERVPGI SEPEPERECF SDADLPQGWR TLRGPLQHHA 370 380 390 400 410 420 HDTGDGLSLT VSPAELSGSG TPSFVARRQE HQCFEARTSV SFRQRASSEQ AGLVVFHDER 430 440 450 460 470 480 HFATLAVTLD ADGKRIVRFE RAGTSGTSGE IALEHDGEAT LRVVGDLDAY SFSYWNGRES 490 500 510 520 530 540 EWLTIGMVPR AWFSTEHAGG FVGVHVGLHA TGTRPETVDA AHFPWFEYVP LTDRATALTL RPVIAAGQ

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ01800.1.
RefSeq	YP_001710412.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RCN2.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RCN2.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6157461.
GenomeReviews	Gene locus CMS1691 in contig AM849034_GR.
KEGG	cms:CMS_1691.
PATRIC	21460412. VBIClaMic4666_1753.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG347235.
OMA	PIWIEAP.
ProtClustDB	CLSK2324900.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0RCN2_CLAMS

Accession

Primary (citable) accession number: B0RCN2

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)