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B0RCA8 (B0RCA8_CLAMS) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine dehydrogenase PIRNR PIRNR000183
EC=1.4.1.1 PIRNR PIRNR000183
Gene names
Name:ald EMBL CAQ02996.1
Ordered Locus Names:CMS2925
OrganismClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ02996.1
Taxonomic identifier31964 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length372 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH. PIRNR PIRNR000183

Pathway

Amino-acid degradation; L-alanine degradation via dehydrogenase pathway; NH(3) and pyruvate from L-alanine: step 1/1. PIRNR PIRNR000183

Sequence similarities

Belongs to the AlaDH/PNT family. PIRNR PIRNR000183

Ontologies

Keywords
   LigandNAD PIRNR PIRNR000183
   Molecular functionOxidoreductase PIRNR PIRNR000183 EMBL CAQ02996.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionalanine dehydrogenase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B0RCA8 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: DF48AB862A2D47F5

FASTA37238,874
        10         20         30         40         50         60 
MKVGIPTEIK NNENRVAATP AGVHELVRRG HEVLVQEGAG LGSSITDADY VEAGATIVAT 

        70         80         90        100        110        120 
ADEVWGQADL LLKVKEPILE EYPRMRAGQT LFTYLHLAAS RPCTDALVAS GTTAIAYETV 

       130        140        150        160        170        180 
QLPNRQLPLL QPMSEVAGRL STQVGAYHLM RAAGGRGILL GGVPGTPKAR VVVIGGGVAG 

       190        200        210        220        230        240 
EHAAANALGM GADVTIIDLS IPRLRELEIR FGGQVQTRVS SAYEIAAQLK DADLVIGSVL 

       250        260        270        280        290        300 
IPGAQAPKLV TDAMVATMKK GSVLVDIAID QGGCFEGSRP TTHDDPTFAV HDSVYYCVAN 

       310        320        330        340        350        360 
MPGAVPETST RALTNATLPY VIALAEKGWK RALAEDPALA LGLNVHDGHV TEPHVAAALD 

       370 
MPLTPVAEVL AA

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References

[1]"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation."
Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A.
J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM849034 Genomic DNA. Translation: CAQ02996.1.
RefSeqYP_001711555.1. NC_010407.1.

3D structure databases

ProteinModelPortalB0RCA8.
SMRB0RCA8. Positions 1-371.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0RCA8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6158435.
GenomeReviewsGene locus CMS2925 in contig AM849034_GR.
KEGGcms:CMS_2925.
PATRIC21462889. VBIClaMic4666_2979.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG289735.
OMAVAHGHEV.
ProtClustDBCLSK2325569.

Family and domain databases

InterProIPR008142. Ala_DH/PNT_CS1.
IPR008143. Ala_DH/PNT_CS2.
IPR008141. Ala_DH/Pyr_transHydgase.
IPR007886. AlaDH/PNT_N.
IPR007698. AlaDH/PNT_NAD(H)-bd.
[Graphical view]
KOK00259.
PANTHERPTHR10160:SF3. PTHR10160:SF3. 1 hit.
PfamPF01262. AlaDh_PNT_C. 1 hit.
PF05222. AlaDh_PNT_N. 1 hit.
[Graphical view]
PIRSFPIRSF000183. Alanine_dh. 1 hit.
SMARTSM01002. AlaDh_PNT_C. 1 hit.
SM01003. AlaDh_PNT_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00518. AlaDH. 1 hit.
PROSITEPS00836. ALADH_PNT_1. 1 hit.
PS00837. ALADH_PNT_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0RCA8_CLAMS
AccessionPrimary (citable) accession number: B0RCA8
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info