B0RC62 (B0RC62_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Riboflavin synthase alpha chain EMBL CAQ02948.1
EC=2.5.1.9 EMBL CAQ02948.1

Gene names

Name:	ribE EMBL CAQ02948.1
Ordered Locus Names:	CMS2877

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ02948.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	224 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Transferase EMBL CAQ02948.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro riboflavin synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RC62 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 3AD227890DC90BF6	FASTA	224	23,466
	10 20 30 40 50 60 MMFTGIIEER GRVLALDAEG DSARITVEAP LAVSDARHGD SISVDGVCLT VVAQTPEGFT 70 80 90 100 110 120 ADVMRQTLVM SSLGRLGVGD RVNLERAARV GDRLGGHIVQ GHVDGTGRLL ATTPGEAWRI 130 140 150 160 170 180 LRFSLPAELS PLVVDRGSIT VQGVSLTVSA VSPTDTPDAD AWFEVSLIPE TLAATTLGAL 190 200 210 220 ELGDEVNLET DVLARHVQRM LALDARRDSA SATDAASATG EARA

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ02948.1.
RefSeq	YP_001711510.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RC62.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RC62.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6158932.
GenomeReviews	Gene locus CMS2877 in contig AM849034_GR.
KEGG	cms:CMS_2877.
PATRIC	21462795. VBIClaMic4666_2932.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG289809.
OMA	PVNLEVD.
ProtClustDB	PRK09289.
Family and domain databases
InterPro	IPR023366. ATPase_F1/A1-cplx_a_su_N. IPR001783. Lumazine-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view]
Gene3D	G3DSA:2.40.30.20. G3DSA:2.40.30.20. 2 hits.
KO	K00793.
PANTHER	PTHR21098. Lumazine_bd. 1 hit.
Pfam	PF00677. Lum_binding. 2 hits. [Graphical view]
PIRSF	PIRSF000498. Riboflavin_syn_A. 1 hit.
SUPFAM	SSF63380. Riboflavin_synthase_like_b-brl. 2 hits.
TIGRFAMs	TIGR00187. RibE. 1 hit.
PROSITE	PS51177. LUMAZINE_BIND. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0RC62_CLAMS

Accession

Primary (citable) accession number: B0RC62

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)