B0RBJ9 (B0RBJ9_CLAMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative sugar hydrolase EMBL CAQ02895.1

Gene names

Ordered Locus Names:

CMS2824

Organism

Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) [Complete proteome] [HAMAP] EMBL CAQ02895.1

Taxonomic identifier

31964 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	569 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL CAQ02895.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0RBJ9 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 149C456A7EB1568C	FASTA	569	60,792
	10 20 30 40 50 60 MHALPLRSAT RLPPIAHREE TDDMTASPSR PPAAGPARRV RDRVRLLARR HPRALIVIVA 70 80 90 100 110 120 ILLVAALVVA VRGITGADRG PVTPPPPAPR AADGGIHIRP SGEFMNDPQR PFLLDGVWHA 130 140 150 160 170 180 YALVNADHPG GNGSSWRHYT SADMVTWHDE GVAIDKYDTP LGDAETGSVV VDTANTSGLG 190 200 210 220 230 240 AGTVIAILTQ QSDGVQRQSL YYSTDGGYRF APYARNPVMD NPGGPDFRDP KVVWDGAHGR 250 260 270 280 290 300 WSMALAEGRR IGFYTSPDLI HWTYRSDFAR DDLGTMETPD VFPIASADEP DRVRWVLGVG 310 320 330 340 350 360 ANGAAQGRGT GYAYWVGDFD GERFTTDDDT PRWLDQGADL YAAVTWADPA DGTAPTRRYA 370 380 390 400 410 420 MGWTSSWDYA DRLPLRDGGA GGGQSLVREL RLVPDGDGWA LRSTPLDALA GREGDARPIP 430 440 450 460 470 480 DARVDSDAPL ADAPDGPSRL RLTLTPDPAD PARETRVRLA SPEGGTVTVG FDAARRQAFV 490 500 510 520 530 540 VRDDDPDGLM PDAYDRVSTA PLPDAAAGDP VTLDLVLDDR TLEAFVDGDA AVLTSATVGT 550 560 LAGAGLSVEA VDGATRLTDA SWTAFDVGR

References

[1]

"Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation." Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J., Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D., Parkhill J., Ishimaru C.A. J. Bacteriol. 190:2150-2160(2008) [PubMed: 18192393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM849034 Genomic DNA. Translation: CAQ02895.1.
RefSeq	YP_001711457.1. NC_010407.1.
3D structure databases
ProteinModelPortal	B0RBJ9.
ModBase	Search...
Protein-protein interaction databases
STRING	B0RBJ9.
Protein family/group databases
CAZy	GH32. Glycoside Hydrolase Family 32.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6158356.
GenomeReviews	Gene locus CMS2824 in contig AM849034_GR.
KEGG	cms:CMS_2824.
PATRIC	21462685. VBIClaMic4666_2877.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG693902.
OMA	MNDPQRP.
ProtClustDB	CLSK849656.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR001362. Glyco_hydro_32. IPR013148. Glyco_hydro_32_N. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01212.
Pfam	PF00251. Glyco_hydro_32N. 1 hit. [Graphical view]
SMART	SM00640. Glyco_32. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0RBJ9_CLAMS

Accession

Primary (citable) accession number: B0RBJ9

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)