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B0R9X1 (B0R9X1_HALS3) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase HAMAP MF_00123
EC=6.1.1.19 HAMAP MF_00123
Alternative name(s):
Arginyl-tRNA synthetase HAMAP MF_00123
Gene names
Name:argS HAMAP MF_00123 EMBL CAP15552.1
Ordered Locus Names:OE5203F
Encoded onPlasmid PHS3 EMBL CAP15552.1
OrganismHalobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) [Complete proteome] [HAMAP]
Taxonomic identifier478009 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halobacterium

Protein attributes

Sequence length631 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP MF_00123

Subcellular location

Cytoplasm By similarity HAMAP MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00123 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif132 – 14211"HIGH" region By similarity HAMAP MF_00123

Sequences

Sequence LengthMass (Da)Tools
B0R9X1 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 1BF5F0A47AF1B30E

FASTA63170,471
        10         20         30         40         50         60 
MLYNLRQELL AGIRAATSDA GYDYEVDQSA IELEDITDEE KGEFSSPISF SIAAAAGAPP 

        70         80         90        100        110        120 
VDVAAAIADA HRSNGLPAEV EAVTVEGGHI NYHADTTDLA DATLSTILRD GSEYGTRTDA 

       130        140        150        160        170        180 
DPDTILADVS SPNIAKPLHV GHLRNTILSD AVMNILEARG HDVTRDNHLG DWGVQFGNLM 

       190        200        210        220        230        240 
HEYTEFGDEA TLEDDAIEHL LDLYQQFEQR DSMLADLEDD ETVTDQFADA VTEERDYHAD 

       250        260        270        280        290        300 
SGKEWFTRLE QGDEDATALW ERFRTVSIDR FKQTYDDLDV AFDVWNGESF YAQEGWNDVI 

       310        320        330        340        350        360 
IEKAIENDVA MRGEGESVYI PVYPDDYENV GDPQAADVDA SLDRARQMRE ANDDLEDADF 

       370        380        390        400        410        420 
DPFYIVKSDG STLYGTRDLA TIEYRIEEYD ADQSVYVVAN EQNQYFQQLF VAARKMGYND 

       430        440        450        460        470        480 
IKLKHIDYGL ISLPEGSMST RKGQIITARE VLDRAQDRAE EIIAEKGRID DAEAQSVATK 

       490        500        510        520        530        540 
IALATIKYEM VAAKRERDTT FDIDESVALE GDTGPYVQYA ATRGYSILDG ADAAPEIDDL 

       550        560        570        580        590        600 
DPSVFNDTDV ELLFELARYP LVLERCEERY DAAPLAHYLL QLAHVFNSFY HKNAVLDAEN 

       610        620        630 
ARTERLLLTK ATTQIFDNGL GLLGIDVLEE M

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References

[1]"Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1."
Pfeiffer F., Schuster S.C., Broicher A., Falb M., Palm P., Rodewald K., Ruepp A., Soppa J., Tittor J., Oesterhelt D.
Genomics 91:335-346(2008) [PubMed: 18313895] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29341 / DSM 671 / R1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM774418 Genomic DNA. Translation: CAP15552.1.
RefSeqYP_001690685.1. NC_010368.1.

3D structure databases

ProteinModelPortalB0R9X1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0R9X1.

Proteomic databases

PRIDEB0R9X1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5954981.
GenomeReviewsGene locus OE5203F in contig AM774418_GR.
KEGGhsl:OE5203F.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG695395.
OMAFHEEAEK.
PhylomeDBB0R9X1.
ProtClustDBCLSK2301553.

Family and domain databases

HAMAPMF_00123. Arg_tRNA_synth.
[Tree]
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-synth_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
Gene3DG3DSA:3.30.1360.70. Arg-tRNA-synth_Ic_N. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 2 hits.
KOK01887.
PANTHERPTHR11956. Arg_tRNA-synt_1c. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 2 hits.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0R9X1_HALS3
AccessionPrimary (citable) accession number: B0R9X1
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info