B0R7M9 (B0R7M9_HALS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-directed DNA polymerase type III subunit 2 (Intein-containing) EMBL CAP14748.1
EC=2.7.7.7 EMBL CAP14748.1

Gene names

Name:	polA2 EMBL CAP14748.1
Ordered Locus Names:	OE4293R

Organism

Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) [Complete proteome] [HAMAP]

Taxonomic identifier

478009 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halobacterium

Protein attributes

Sequence length	1370 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	DNA-directed DNA polymerase EMBL CAP14748.1 Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA catabolic process Inferred from electronic annotation. Source: InterPro DNA replication Inferred from electronic annotation. Source: InterPro intein-mediated protein splicing Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0R7M9 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 07878AA9976790C9	FASTA	1,370	150,296
	10 20 30 40 50 60 MRPTDETYFE TLETGLDDAF EVAEAARERG EDPTPNVEIP VAKDMADRVE NILGIDGVAE 70 80 90 100 110 120 RVRDLDGEMS REEAALELVA DFVDGRVGDY DTDAGKIEGA VRTAVALLTE GVVAAPIEGI 130 140 150 160 170 180 DRVEVNDNDD GTQYVAVYYA GPIRSAGGTA QALSVLVADY ARAMLGIDAF KPRDDEIERY 190 200 210 220 230 240 AEEVDLYDSE TGLQYSPKDA ETTFITEHCP VMLDGEATGN EEVDGFRDLE RIDTNSPRGG 250 260 270 280 290 300 MCLVLAEGIA LKAPKIQRYT RNLDEVAWPW LQDLIDGTIG ADDADEDTPD AGSDSDATDE 310 320 330 340 350 360 GDAPSASTDA EEPPRAAPSD KFLRDLIAGR PVFGHPSKNG GFRLRYGRAR NHGNATAGVH 370 380 390 400 410 420 PATMHLLDDF LATGTQIKTE RPGKAAGIVP VDSIEGPTVK LANGDVRHIN DPADALDVRN 430 440 450 460 470 480 GVAEILDVGE YLVNYGEFVE NNHELAPASY APEWWIQDLD AAGADVQALR DSPYVDLTAP 490 500 510 520 530 540 TADQAMAWAT DYDAPLHPAY TYLWHDIDVE QFRALADAVA DAHTDASDDD DRGVLVLDHT 550 560 570 580 590 600 TTVRETLEAL LVTHHQGDDT IRVDDWLPLA RSLGVTESLD REWETLSEAA AEWPNAVRAV 610 620 630 640 650 660 NEVAPFSVQE RAPTRIGNRM GRPEKSESRD LSPAVHTLFP IGDAGGSQRD VADAARYAPD 670 680 690 700 710 720 MSDTPGEIPV RVGDRVCPSC DEHTYESRCP DCGDWTDPHY ECRDCGAVAT PDESGRVECP 730 740 750 760 770 780 NCGRDLDNVT TQVIDINDEY HGALRAVGER ENAFDQLKGV KGLLSAEKTP EPMAKGVLRA 790 800 810 820 830 840 KHDVTAFKDG TVRYDMTDLP VTAVTPAELD VTAGQFRELG YNQDIHGDPL EHDDQLVELR 850 860 870 880 890 900 VQDVVLSDGA ADHMLKTADF VDDLLTQYYG LDAFYDLDDR DDLVGELVFG MAPHTSAAVV 910 920 930 940 950 960 GRVAGFTSAS VGYAHPYFHA AKRRNCFHPE TNVWFRDESG EWHHDPIETL VEARLDPDTA 970 980 990 1000 1010 1020 DEDDFGALVQ ALDGDVFVPS VTEDGEETLQ RVEAVSKHPA PDHLLAVETK RGRELTVTPD 1030 1040 1050 1060 1070 1080 HSMRRWTGDG IERVDARELT AGDALPAPTQ VPGDGETATS ELRSESLDGT HPQRRFGDGG 1090 1100 1110 1120 1130 1140 SVRTDEVVSV EPVRSSVDHT YSLTVAETNT LVANGLFTGQ CDGDEDCVML LMDGLINFSK 1150 1160 1170 1180 1190 1200 SYLPDKRGGR MDAPLVMSSR IDPAEIDDEA HNIDIDREYP REFYEATREL ADPEDVADLI 1210 1220 1230 1240 1250 1260 TLAESTVGTD EEYTGFGHTH ATSNIHLGPS LSAYKTLGSM MDKMDAQLEL ARKLRSVAET 1270 1280 1290 1300 1310 1320 DVAERVIEYH FLPDLIGNLR AFSRQETRCL DCGEKYRRMP LSGDCRECGG RVNLTVHEGS 1330 1340 1350 1360 1370 VNKYMDTAMR VATEYDCREY TKQRLEIMDR RLESVFEDDT NKQSGISDFM

References

[1]

"Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1." Pfeiffer F., Schuster S.C., Broicher A., Falb M., Palm P., Rodewald K., Ruepp A., Soppa J., Tittor J., Oesterhelt D. Genomics 91:335-346(2008) [PubMed: 18313895] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29341 / DSM 671 / R1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM774415 Genomic DNA. Translation: CAP14748.1.
RefSeq	YP_001690094.1. NC_010364.1.
3D structure databases
ProteinModelPortal	B0R7M9.
ModBase	Search...
Protein-protein interaction databases
STRING	B0R7M9.
Proteomic databases
PRIDE	B0R7M9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5953348.
GenomeReviews	Gene locus OE4293R in contig AM774415_GR.
KEGG	hsl:OE4293R.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG497074.
OMA	NCDGDED.
PhylomeDB	B0R7M9.
ProtClustDB	PRK14714.
Family and domain databases
HAMAP	MF_00324. DNApol_II_L_arch. [Tree]
InterPro	IPR003586. Hedgehog_hint_C. IPR003587. Hedgehog_hint_N. IPR006141. Intein_splice_site. IPR004475. PolC_DP2. IPR016033. PolC_DP2_N. [Graphical view]
KO	K02322.
Pfam	PF03833. PolC_DP2. 1 hit. [Graphical view]
PIRSF	PIRSF016275. PolC_DP2. 1 hit.
SMART	SM00305. HintC. 1 hit. SM00306. HintN. 1 hit. [Graphical view]
TIGRFAMs	TIGR01443. Intein_Cterm. 1 hit. TIGR01445. Intein_Nterm. 1 hit. TIGR00354. PolC. 1 hit.
PROSITE	PS50817. INTEIN_N_TER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0R7M9_HALS3

Accession

Primary (citable) accession number: B0R7M9

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)