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B0R6U7

- PDAD_HALS3

UniProt

B0R6U7 - PDAD_HALS3

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Protein
Pyruvoyl-dependent arginine decarboxylase
Gene
pdaD, OE_3803R
Organism
Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

L-arginine = agmatine + CO2.

Cofactori

Pyruvoyl group By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sitei38 – 392Cleavage (non-hydrolytic) By similarity

GO - Molecular functioni

  1. arginine decarboxylase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. arginine catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Decarboxylase, Lyase

Keywords - Ligandi

Pyruvate

Enzyme and pathway databases

BioCyciHSAL478009:GJVF-1620-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19)
Short name:
PvlArgDC
Cleaved into the following 2 chains:
Gene namesi
Name:pdaD
Ordered Locus Names:OE_3803R
OrganismiHalobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Taxonomic identifieri478009 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalobacterium
ProteomesiUP000001321: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 3838Pyruvoyl-dependent arginine decarboxylase subunit beta By similarity
PRO_1000145468Add
BLAST
Chaini39 – 160122Pyruvoyl-dependent arginine decarboxylase subunit alpha By similarity
PRO_1000145469Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei39 – 391Pyruvic acid (Ser) By similarity

Proteomic databases

PRIDEiB0R6U7.

Interactioni

Protein-protein interaction databases

STRINGi478009.OE3803R.

Structurei

3D structure databases

ProteinModelPortaliB0R6U7.

Family & Domainsi

Sequence similaritiesi

Belongs to the PdaD family.

Phylogenomic databases

eggNOGiCOG1945.
HOGENOMiHOG000092310.
KOiK02626.
OMAiAANIHNY.

Family and domain databases

Gene3Di3.50.20.10. 1 hit.
InterProiIPR016104. Pyr-dep_his/arg-deCO2ase.
IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
IPR002724. Pyruvoyl-dep_arg_deCO2ase.
[Graphical view]
PfamiPF01862. PvlArgDC. 1 hit.
[Graphical view]
PIRSFiPIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
ProDomiPD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF56271. SSF56271. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B0R6U7-1 [UniParc]FASTAAdd to Basket

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MPRIRIAWGS GVAPTEMAAY DAALADANVH NYNLIRVSSV IPADATVSPV    50
DTAPDLGPAG NTLTVVEARG QTAGPGQASA GLAWAPRDGA PGLFYEAADE 100
TTPDDVADRV TTGITAGMDV RDWDGVEPSV RTETVTADAG EHAAAVVIAA 150
YGDSDPVFDQ 160
Length:160
Mass (Da):16,364
Last modified:April 8, 2008 - v1
Checksum:iB77749F3A1E97BCD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM774415 Genomic DNA. Translation: CAP14466.1.
RefSeqiWP_010903471.1. NC_010364.1.
YP_001689812.1. NC_010364.1.

Genome annotation databases

EnsemblBacteriaiCAP14466; CAP14466; OE_3803R.
GeneIDi5953199.
KEGGihsl:OE3803R.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM774415 Genomic DNA. Translation: CAP14466.1 .
RefSeqi WP_010903471.1. NC_010364.1.
YP_001689812.1. NC_010364.1.

3D structure databases

ProteinModelPortali B0R6U7.
ModBasei Search...

Protein-protein interaction databases

STRINGi 478009.OE3803R.

Proteomic databases

PRIDEi B0R6U7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAP14466 ; CAP14466 ; OE_3803R .
GeneIDi 5953199.
KEGGi hsl:OE3803R.

Phylogenomic databases

eggNOGi COG1945.
HOGENOMi HOG000092310.
KOi K02626.
OMAi AANIHNY.

Enzyme and pathway databases

BioCyci HSAL478009:GJVF-1620-MONOMER.

Family and domain databases

Gene3Di 3.50.20.10. 1 hit.
InterProi IPR016104. Pyr-dep_his/arg-deCO2ase.
IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
IPR002724. Pyruvoyl-dep_arg_deCO2ase.
[Graphical view ]
Pfami PF01862. PvlArgDC. 1 hit.
[Graphical view ]
PIRSFi PIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
ProDomi PD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF56271. SSF56271. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1."
    Pfeiffer F., Schuster S.C., Broicher A., Falb M., Palm P., Rodewald K., Ruepp A., Soppa J., Tittor J., Oesterhelt D.
    Genomics 91:335-346(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29341 / DSM 671 / R1.

Entry informationi

Entry nameiPDAD_HALS3
AccessioniPrimary (citable) accession number: B0R6U7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 8, 2008
Last modified: September 3, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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