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Protein

30S ribosomal protein S8e

Gene

rps8e

Organism
Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciHSAL478009:GJVF-1357-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8eUniRule annotation
Gene namesi
Name:rps8eUniRule annotation
Ordered Locus Names:OE_3357R
OrganismiHalobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Taxonomic identifieri478009 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalobacterium
Proteomesi
  • UP000001321 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12412430S ribosomal protein S8ePRO_1000090255Add
BLAST

Proteomic databases

PRIDEiB0R639.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliB0R639.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8e family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000108969.
OMAiNPNYVRR.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0R639-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQYQGRSKRS KTGARLRPRS KKSKSELGRE PTETTVGEPR FRTVDVRGDA
60 70 80 90 100
EKVRVLSTNV VNVATDSGAE RATIEDVSAN DANPNYARRN IITKGAIIET
110 120
DAGTARVTSR PGQDGQVNAT RVDE
Length:124
Mass (Da):13,515
Last modified:April 8, 2008 - v1
Checksum:iB7038CF79A83742B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM774415 Genomic DNA. Translation: CAP14208.1.
RefSeqiWP_010903217.1. NC_010364.1.

Genome annotation databases

EnsemblBacteriaiCAP14208; CAP14208; OE_3357R.
GeneIDi5953499.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM774415 Genomic DNA. Translation: CAP14208.1.
RefSeqiWP_010903217.1. NC_010364.1.

3D structure databases

ProteinModelPortaliB0R639.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB0R639.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAP14208; CAP14208; OE_3357R.
GeneIDi5953499.

Phylogenomic databases

HOGENOMiHOG000108969.
OMAiNPNYVRR.

Enzyme and pathway databases

BioCyciHSAL478009:GJVF-1357-MONOMER.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1."
    Pfeiffer F., Schuster S.C., Broicher A., Falb M., Palm P., Rodewald K., Ruepp A., Soppa J., Tittor J., Oesterhelt D.
    Genomics 91:335-346(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29341 / DSM 671 / R1.

Entry informationi

Entry nameiRS8E_HALS3
AccessioniPrimary (citable) accession number: B0R639
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: April 8, 2008
Last modified: November 11, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.