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B0R5P3 (B0R5P3_HALS3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:cdc48b EMBL CAP14060.1
Ordered Locus Names:OE_3112R EMBL CAP14060.1
OrganismHalobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) [Complete proteome] [HAMAP] EMBL CAP14060.1
Taxonomic identifier478009 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalobacterium

Protein attributes

Sequence length759 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the AAA ATPase family. RuleBase RU003651

Sequences

Sequence LengthMass (Da)Tools
B0R5P3 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: D7F32913D208C863

FASTA75982,155
        10         20         30         40         50         60 
MKLTVKPLKQ KDAGRGLAAV DRDSMDELAL ENGDYVVIDG QGDHGRAVAR VWPGYPEDDG 

        70         80         90        100        110        120 
DGVVRIDGRL RKEADVGIDD QVTVEPADIK PAGGVTVALP QNLRVRGNIA PMVRDRLNGR 

       130        140        150        160        170        180 
PVTAGQTIPI SFGFGGMSTI SGQQIPVKIA ETEPSGTVVV SNDTEIQLSE RPAEEIAPGA 

       190        200        210        220        230        240 
GEAAETGDPT PNVTYEDIGG LDGELEQVRE MIELPMRHPE LFQQLGIDPP KGVLLHGPPG 

       250        260        270        280        290        300 
TGKTLIAKAV ANEIDAHFET ISGPEIMSKY YGESEEKLRE VFDEAEENAP AIVFVDELDS 

       310        320        330        340        350        360 
IAPKRGETQG DVERRVVAQL LSLMDGLEDR GDVTVIAATN RVDAIDPALR RGGRFDREIE 

       370        380        390        400        410        420 
IGVPDQDGRK EILQVHTRGM PLVEDIDLDD YAESTHGFVG ADIESLAKEA AMNALRRVRP 

       430        440        450        460        470        480 
DIDLESDEID AELLESISIT EADFKRALNG IEPSALREVF VEVPDTTWAD VGGLTDTKER 

       490        500        510        520        530        540 
LRETIQWPLD YPDVFSEMDL QSAKGVLLYG PPGTGKTLLA KAVANEANSN FISVKGPELL 

       550        560        570        580        590        600 
NKYVGESEKG VREVFEKARS NAPTVVFFDE IDAIAGQRGR ATSDSGVGER VVSQLLTELD 

       610        620        630        640        650        660 
GIEALEDVVV VATSNRPDLI DDALLRPGRL DRHIHVPVPD ADARRAILDV HTRDKPLADD 

       670        680        690        700        710        720 
VDLDVVAQRM DGFVGADVEA LVREATMNAT REFINSVDPA DASDSVGNVR VTMAHFEAAL 

       730        740        750 
GEVTASVDAD VKENYEEIEQ RFNTADTPTD DEPASGAFR 

« Hide

References

[1]"Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1."
Pfeiffer F., Schuster S.C., Broicher A., Falb M., Palm P., Rodewald K., Ruepp A., Soppa J., Tittor J., Oesterhelt D.
Genomics 91:335-346(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29341 / DSM 671 / R1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM774415 Genomic DNA. Translation: CAP14060.1.
RefSeqYP_001689408.1. NC_010364.1.

3D structure databases

ProteinModelPortalB0R5P3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING478009.OE3112R.

Proteomic databases

PRIDEB0R5P3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAP14060; CAP14060; OE_3112R.
GeneID5952989.
KEGGhsl:OE3112R.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0464.
HOGENOMHOG000223224.
KOK13525.
OMAQAIDVPF.
ProtClustDBCLSK511429.

Enzyme and pathway databases

BioCycHSAL478009:GJVF-1207-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR005938. AAA_ATPase_CDC48.
IPR009010. Asp_de-COase-like_dom.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR004201. Cdc48_dom2.
IPR003338. CDC4_N-term_subdom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00004. AAA. 2 hits.
PF02933. CDC48_2. 1 hit.
PF02359. CDC48_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 2 hits.
SM01072. CDC48_2. 1 hit.
SM01073. CDC48_N. 1 hit.
[Graphical view]
SUPFAMSSF50692. SSF50692. 1 hit.
SSF52540. SSF52540. 2 hits.
TIGRFAMsTIGR01243. CDC48. 1 hit.
PROSITEPS00674. AAA. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0R5P3_HALS3
AccessionPrimary (citable) accession number: B0R5P3
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)