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Protein
Submitted name:

AAA-type ATPase (CDC48 subfamily)

Gene

cdc48b

Organism
Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. hydrolase activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciHSAL478009:GJVF-1207-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AAA-type ATPase (CDC48 subfamily)Imported
Gene namesi
Name:cdc48bImported
Ordered Locus Names:OE_3112RImported
OrganismiHalobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)Imported
Taxonomic identifieri478009 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalobacterium
ProteomesiUP000001321: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiB0R5P3.

Interactioni

Protein-protein interaction databases

STRINGi478009.OE3112R.

Structurei

3D structure databases

ProteinModelPortaliB0R5P3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the AAA ATPase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0464.
HOGENOMiHOG000223224.
KOiK13525.
OMAiRVTMDHF.

Family and domain databases

Gene3Di3.10.330.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR005938. AAA_ATPase_CDC48.
IPR009010. Asp_de-COase-like_dom.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR004201. Cdc48_dom2.
IPR029067. CDC48_domain_2-like.
IPR003338. CDC4_N-term_subdom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00004. AAA. 2 hits.
PF02933. CDC48_2. 1 hit.
PF02359. CDC48_N. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
SM01072. CDC48_2. 1 hit.
SM01073. CDC48_N. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.
SSF52540. SSF52540. 2 hits.
SSF54585. SSF54585. 1 hit.
TIGRFAMsiTIGR01243. CDC48. 1 hit.
PROSITEiPS00674. AAA. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0R5P3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLTVKPLKQ KDAGRGLAAV DRDSMDELAL ENGDYVVIDG QGDHGRAVAR
60 70 80 90 100
VWPGYPEDDG DGVVRIDGRL RKEADVGIDD QVTVEPADIK PAGGVTVALP
110 120 130 140 150
QNLRVRGNIA PMVRDRLNGR PVTAGQTIPI SFGFGGMSTI SGQQIPVKIA
160 170 180 190 200
ETEPSGTVVV SNDTEIQLSE RPAEEIAPGA GEAAETGDPT PNVTYEDIGG
210 220 230 240 250
LDGELEQVRE MIELPMRHPE LFQQLGIDPP KGVLLHGPPG TGKTLIAKAV
260 270 280 290 300
ANEIDAHFET ISGPEIMSKY YGESEEKLRE VFDEAEENAP AIVFVDELDS
310 320 330 340 350
IAPKRGETQG DVERRVVAQL LSLMDGLEDR GDVTVIAATN RVDAIDPALR
360 370 380 390 400
RGGRFDREIE IGVPDQDGRK EILQVHTRGM PLVEDIDLDD YAESTHGFVG
410 420 430 440 450
ADIESLAKEA AMNALRRVRP DIDLESDEID AELLESISIT EADFKRALNG
460 470 480 490 500
IEPSALREVF VEVPDTTWAD VGGLTDTKER LRETIQWPLD YPDVFSEMDL
510 520 530 540 550
QSAKGVLLYG PPGTGKTLLA KAVANEANSN FISVKGPELL NKYVGESEKG
560 570 580 590 600
VREVFEKARS NAPTVVFFDE IDAIAGQRGR ATSDSGVGER VVSQLLTELD
610 620 630 640 650
GIEALEDVVV VATSNRPDLI DDALLRPGRL DRHIHVPVPD ADARRAILDV
660 670 680 690 700
HTRDKPLADD VDLDVVAQRM DGFVGADVEA LVREATMNAT REFINSVDPA
710 720 730 740 750
DASDSVGNVR VTMAHFEAAL GEVTASVDAD VKENYEEIEQ RFNTADTPTD

DEPASGAFR
Length:759
Mass (Da):82,155
Last modified:April 8, 2008 - v1
Checksum:iD7F32913D208C863
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM774415 Genomic DNA. Translation: CAP14060.1.
RefSeqiWP_010903073.1. NC_010364.1.
YP_001689408.1. NC_010364.1.

Genome annotation databases

EnsemblBacteriaiCAP14060; CAP14060; OE_3112R.
GeneIDi5952989.
KEGGihsl:OE3112R.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM774415 Genomic DNA. Translation: CAP14060.1.
RefSeqiWP_010903073.1. NC_010364.1.
YP_001689408.1. NC_010364.1.

3D structure databases

ProteinModelPortaliB0R5P3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi478009.OE3112R.

Proteomic databases

PRIDEiB0R5P3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAP14060; CAP14060; OE_3112R.
GeneIDi5952989.
KEGGihsl:OE3112R.

Phylogenomic databases

eggNOGiCOG0464.
HOGENOMiHOG000223224.
KOiK13525.
OMAiRVTMDHF.

Enzyme and pathway databases

BioCyciHSAL478009:GJVF-1207-MONOMER.

Family and domain databases

Gene3Di3.10.330.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR005938. AAA_ATPase_CDC48.
IPR009010. Asp_de-COase-like_dom.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR004201. Cdc48_dom2.
IPR029067. CDC48_domain_2-like.
IPR003338. CDC4_N-term_subdom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00004. AAA. 2 hits.
PF02933. CDC48_2. 1 hit.
PF02359. CDC48_N. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
SM01072. CDC48_2. 1 hit.
SM01073. CDC48_N. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.
SSF52540. SSF52540. 2 hits.
SSF54585. SSF54585. 1 hit.
TIGRFAMsiTIGR01243. CDC48. 1 hit.
PROSITEiPS00674. AAA. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1."
    Pfeiffer F., Schuster S.C., Broicher A., Falb M., Palm P., Rodewald K., Ruepp A., Soppa J., Tittor J., Oesterhelt D.
    Genomics 91:335-346(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29341 / DSM 671 / R1Imported.

Entry informationi

Entry nameiB0R5P3_HALS3
AccessioniPrimary (citable) accession number: B0R5P3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: March 4, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.