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Protein
Submitted name:

Protein O-mannosyl-transferase 1

Gene

Pomt1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • extracellular matrix organization Source: MGI
  • protein O-linked glycosylation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-mannosyl-transferase 1Imported
Gene namesi
Name:Pomt1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:2138994. Pomt1.

Subcellular locationi

GO - Cellular componenti

  • acrosomal vesicle Source: MGI
  • endoplasmic reticulum membrane Source: MGI
  • sarcoplasmic reticulum Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiB0R071.
ExpressionAtlasiB0R071. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038722.

Structurei

3D structure databases

ProteinModelPortaliB0R071.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00740000115531.
HOVERGENiHBG097130.

Family and domain databases

InterProiIPR027005. GlyclTrfase_39_like.
IPR003342. Glyco_trans_39.
[Graphical view]
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiPF02366. PMT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B0R071-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRFLKRPLV VTVDINLNLV ALTGLGLLTR LWQLSYPRAV VFDEVYYGQY
60 70 80 90 100
ISFYMKRIFF LDDSGPPFGH MLLALGGWLG GFDGNFLWNR IGAEYSSNVP
110 120 130 140 150
IWSLRLLPAL AGALSVPMAY QIVLELHFSH GAAIGAALLM LIENALITQS
160 170 180 190 200
RLMLLESILI FFNLLAVLSY LKFFNSQTHS PFSVHWWLWL LLTGVSCSCA
210 220 230
VGIKYMGIFT YLLVLGIAAV HAWNLIGDQT LSN
Length:233
Mass (Da):26,108
Last modified:April 8, 2008 - v1
Checksum:i0108173CC91EE612
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei233 – 2331Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808027 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000123740; ENSMUSP00000116543; ENSMUSG00000039254.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808027 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliB0R071.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038722.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000123740; ENSMUSP00000116543; ENSMUSG00000039254.

Organism-specific databases

MGIiMGI:2138994. Pomt1.

Phylogenomic databases

GeneTreeiENSGT00740000115531.
HOVERGENiHBG097130.

Miscellaneous databases

NextBioi35545522.
SOURCEiSearch...

Gene expression databases

BgeeiB0R071.
ExpressionAtlasiB0R071. baseline and differential.

Family and domain databases

InterProiIPR027005. GlyclTrfase_39_like.
IPR003342. Glyco_trans_39.
[Graphical view]
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiPF02366. PMT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB0R071_MOUSE
AccessioniPrimary (citable) accession number: B0R071
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: June 24, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.