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Protein
Submitted name:

Protein O-mannosyl-transferase 1

Gene

Pomt1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-mannosyl-transferase 1Imported
Gene namesi
Name:Pomt1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:2138994. Pomt1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 28HelicalSequence analysisAdd BLAST20
Transmembranei68 – 88HelicalSequence analysisAdd BLAST21
Transmembranei100 – 122HelicalSequence analysisAdd BLAST23
Transmembranei128 – 147HelicalSequence analysisAdd BLAST20
Transmembranei154 – 174HelicalSequence analysisAdd BLAST21
Transmembranei186 – 203HelicalSequence analysisAdd BLAST18
Transmembranei208 – 226HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

MaxQBiB0R071.
PaxDbiB0R071.

Expressioni

Gene expression databases

BgeeiENSMUSG00000039254.
ExpressionAtlasiB0R071. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038722.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 232PMTInterPro annotationAdd BLAST213

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3359. Eukaryota.
COG1928. LUCA.
GeneTreeiENSGT00860000133866.
HOVERGENiHBG097130.

Family and domain databases

InterProiIPR027005. GlyclTrfase_39-like.
IPR003342. Glyco_trans_39/83.
[Graphical view]
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiPF02366. PMT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B0R071-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRFLKRPLV VTVDINLNLV ALTGLGLLTR LWQLSYPRAV VFDEVYYGQY
60 70 80 90 100
ISFYMKRIFF LDDSGPPFGH MLLALGGWLG GFDGNFLWNR IGAEYSSNVP
110 120 130 140 150
IWSLRLLPAL AGALSVPMAY QIVLELHFSH GAAIGAALLM LIENALITQS
160 170 180 190 200
RLMLLESILI FFNLLAVLSY LKFFNSQTHS PFSVHWWLWL LLTGVSCSCA
210 220 230
VGIKYMGIFT YLLVLGIAAV HAWNLIGDQT LSN
Length:233
Mass (Da):26,108
Last modified:April 8, 2008 - v1
Checksum:i0108173CC91EE612
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei233Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808027 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000123740; ENSMUSP00000116543; ENSMUSG00000039254.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808027 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038722.

Proteomic databases

MaxQBiB0R071.
PaxDbiB0R071.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000123740; ENSMUSP00000116543; ENSMUSG00000039254.

Organism-specific databases

MGIiMGI:2138994. Pomt1.

Phylogenomic databases

eggNOGiKOG3359. Eukaryota.
COG1928. LUCA.
GeneTreeiENSGT00860000133866.
HOVERGENiHBG097130.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000039254.
ExpressionAtlasiB0R071. baseline and differential.

Family and domain databases

InterProiIPR027005. GlyclTrfase_39-like.
IPR003342. Glyco_trans_39/83.
[Graphical view]
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiPF02366. PMT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB0R071_MOUSE
AccessioniPrimary (citable) accession number: B0R071
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: November 30, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.