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Protein
Submitted name:

Protein O-mannosyl-transferase 1

Gene

Pomt1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-mannosyl-transferase 1Imported
Gene namesi
Name:Pomt1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:2138994 Pomt1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei33 – 52HelicalSequence analysisAdd BLAST20
Transmembranei92 – 112HelicalSequence analysisAdd BLAST21
Transmembranei124 – 146HelicalSequence analysisAdd BLAST23
Transmembranei152 – 171HelicalSequence analysisAdd BLAST20
Transmembranei178 – 198HelicalSequence analysisAdd BLAST21
Transmembranei210 – 226HelicalSequence analysisAdd BLAST17

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

MaxQBiB0R070
PRIDEiB0R070

Expressioni

Gene expression databases

BgeeiENSMUSG00000039254
ExpressionAtlasiB0R070 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini44 – 226PMTInterPro annotationAdd BLAST183

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3359 Eukaryota
COG1928 LUCA
GeneTreeiENSGT00910000144161
HOVERGENiHBG097130

Family and domain databases

InterProiView protein in InterPro
IPR027005 GlyclTrfase_39-like
IPR003342 Glyco_trans_39/83
PANTHERiPTHR10050 PTHR10050, 1 hit
PfamiView protein in Pfam
PF02366 PMT, 1 hit

Sequencei

Sequence statusi: Fragment.

B0R070-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYTLCLNTTV ILQQGVLPSW LFCKMLRFLK RPLVVTVDIN LNLVALTGLG
60 70 80 90 100
LLTRLWQLSY PRAVVFDEVY YGQYISFYMK RIFFLDDSGP PFGHMLLALG
110 120 130 140 150
GWLGGFDGNF LWNRIGAEYS SNVPIWSLRL LPALAGALSV PMAYQIVLEL
160 170 180 190 200
HFSHGAAIGA ALLMLIENAL ITQSRLMLLE SILIFFNLLA VLSYLKFFNS
210 220
QTHSPFSVHW WLWLLLTGVS CSCAVGI
Length:227
Mass (Da):25,557
Last modified:April 8, 2008 - v1
Checksum:i1C234B5AA3054D65
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei227Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808027 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000146485; ENSMUSP00000116117; ENSMUSG00000039254

Similar proteinsi

Entry informationi

Entry nameiB0R070_MOUSE
AccessioniPrimary (citable) accession number: B0R070
Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: May 23, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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