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Protein
Submitted name:

Protein O-mannosyl-transferase 1

Gene

Pomt1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-mannosyl-transferase 1Imported
Gene namesi
Name:Pomt1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:2138994. Pomt1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei33 – 5220HelicalSequence analysisAdd
BLAST
Transmembranei92 – 11221HelicalSequence analysisAdd
BLAST
Transmembranei124 – 14623HelicalSequence analysisAdd
BLAST
Transmembranei152 – 17120HelicalSequence analysisAdd
BLAST
Transmembranei178 – 19821HelicalSequence analysisAdd
BLAST
Transmembranei210 – 22617HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiB0R070.
PRIDEiB0R070.

Expressioni

Gene expression databases

BgeeiB0R070.
ExpressionAtlasiB0R070. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038722.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini44 – 226183PMTInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3359. Eukaryota.
COG1928. LUCA.
GeneTreeiENSGT00740000115531.
HOVERGENiHBG097130.

Family and domain databases

InterProiIPR027005. GlyclTrfase_39-like.
IPR003342. Glyco_trans_39/83.
[Graphical view]
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiPF02366. PMT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B0R070-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYTLCLNTTV ILQQGVLPSW LFCKMLRFLK RPLVVTVDIN LNLVALTGLG
60 70 80 90 100
LLTRLWQLSY PRAVVFDEVY YGQYISFYMK RIFFLDDSGP PFGHMLLALG
110 120 130 140 150
GWLGGFDGNF LWNRIGAEYS SNVPIWSLRL LPALAGALSV PMAYQIVLEL
160 170 180 190 200
HFSHGAAIGA ALLMLIENAL ITQSRLMLLE SILIFFNLLA VLSYLKFFNS
210 220
QTHSPFSVHW WLWLLLTGVS CSCAVGI
Length:227
Mass (Da):25,557
Last modified:April 8, 2008 - v1
Checksum:i1C234B5AA3054D65
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei227 – 2271Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808027 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000146485; ENSMUSP00000116117; ENSMUSG00000039254.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808027 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038722.

Proteomic databases

PaxDbiB0R070.
PRIDEiB0R070.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000146485; ENSMUSP00000116117; ENSMUSG00000039254.

Organism-specific databases

MGIiMGI:2138994. Pomt1.

Phylogenomic databases

eggNOGiKOG3359. Eukaryota.
COG1928. LUCA.
GeneTreeiENSGT00740000115531.
HOVERGENiHBG097130.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiB0R070.
ExpressionAtlasiB0R070. baseline and differential.

Family and domain databases

InterProiIPR027005. GlyclTrfase_39-like.
IPR003342. Glyco_trans_39/83.
[Graphical view]
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiPF02366. PMT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB0R070_MOUSE
AccessioniPrimary (citable) accession number: B0R070
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: June 8, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.