Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Lysine-specific demethylase 4C

Gene

KDM4C

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Lysine-specific demethylase 4CImported
Gene namesi
Name:KDM4CImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

HGNCiHGNC:17071. KDM4C.

PTM / Processingi

Proteomic databases

PaxDbiB0QZ60.

Expressioni

Gene expression databases

BgeeiB0QZ60.
ExpressionAtlasiB0QZ60. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000370710.

Chemistry

BindingDBiB0QZ60.

Structurei

3D structure databases

ProteinModelPortaliB0QZ60.
SMRiB0QZ60. Positions 10-145.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 5843JmjNInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IT40. Eukaryota.
COG5141. LUCA.
GeneTreeiENSGT00530000063342.
HOGENOMiHOG000038019.
HOVERGENiHBG062616.

Family and domain databases

InterProiIPR003349. JmjN.
[Graphical view]
PfamiPF02375. JmjN. 1 hit.
[Graphical view]
SMARTiSM00545. JmjN. 1 hit.
[Graphical view]
PROSITEiPS51183. JMJN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0QZ60-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVAEVESPL NPSCKIMTFR PSMEEFREFN KYLAYMESKG AHRAGLAKVI
60 70 80 90 100
PPKEWKPRQC YDDIDNLLIP APIQQMVTGQ SGLFTQYNIQ KKAMTVKEFR
110 120 130 140 150
QLANSGKYCT PRYLDYEDLE RKYWKNLTFV APIYGADING SIYDEVHSYL

Q
Length:151
Mass (Da):17,591
Last modified:April 8, 2008 - v1
Checksum:iAC482A176AE17C81
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL137020 Genomic DNA. No translation available.
AL161443 Genomic DNA. No translation available.
AL354707 Genomic DNA. No translation available.
AL445592 Genomic DNA. No translation available.
AL513412 Genomic DNA. No translation available.
RefSeqiNP_001291270.1. NM_001304341.1.
UniGeneiHs.709425.

Genome annotation databases

EnsembliENST00000401787; ENSP00000383990; ENSG00000107077.
GeneIDi23081.
UCSCiuc064sbp.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL137020 Genomic DNA. No translation available.
AL161443 Genomic DNA. No translation available.
AL354707 Genomic DNA. No translation available.
AL445592 Genomic DNA. No translation available.
AL513412 Genomic DNA. No translation available.
RefSeqiNP_001291270.1. NM_001304341.1.
UniGeneiHs.709425.

3D structure databases

ProteinModelPortaliB0QZ60.
SMRiB0QZ60. Positions 10-145.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000370710.

Chemistry

BindingDBiB0QZ60.

Proteomic databases

PaxDbiB0QZ60.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000401787; ENSP00000383990; ENSG00000107077.
GeneIDi23081.
UCSCiuc064sbp.1. human.

Organism-specific databases

CTDi23081.
HGNCiHGNC:17071. KDM4C.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IT40. Eukaryota.
COG5141. LUCA.
GeneTreeiENSGT00530000063342.
HOGENOMiHOG000038019.
HOVERGENiHBG062616.

Miscellaneous databases

ChiTaRSiKDM4C. human.
GenomeRNAii23081.
NextBioi35465856.

Gene expression databases

BgeeiB0QZ60.
ExpressionAtlasiB0QZ60. baseline and differential.

Family and domain databases

InterProiIPR003349. JmjN.
[Graphical view]
PfamiPF02375. JmjN. 1 hit.
[Graphical view]
SMARTiSM00545. JmjN. 1 hit.
[Graphical view]
PROSITEiPS51183. JMJN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiB0QZ60_HUMAN
AccessioniPrimary (citable) accession number: B0QZ60
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: April 13, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.