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Protein
Submitted name:

Chromobox protein homolog 6

Gene

CBX6

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Chromobox protein homolog 6Imported
Gene namesi
Name:CBX6Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 22

Organism-specific databases

HGNCiHGNC:1556. CBX6.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiB0QXZ6.
PeptideAtlasiB0QXZ6.
PRIDEiB0QXZ6.

Expressioni

Gene expression databases

BgeeiENSG00000183741.
ExpressionAtlasiB0QXZ6. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000384490.

Structurei

3D structure databases

ProteinModelPortaliB0QXZ6.
SMRiB0QXZ6. Positions 8-63.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 6959ChromoInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2748. Eukaryota.
ENOG41122KC. LUCA.
GeneTreeiENSGT00530000063056.
HOGENOMiHOG000013217.
HOVERGENiHBG003608.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
[Graphical view]
PRINTSiPR00504. CHROMODOMAIN.
SMARTiSM00298. CHROMO. 1 hit.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 1 hit.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0QXZ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELSAVGERV FAAESIIKRR IRKGRIEYLV KWKGWAIKYS TWEPEENILD
60 70 80 90 100
SRLIAAFEQK ERERELYGPK KRGPKPKTFL LKPSASASSP KLHSSAAVHR
110 120 130 140 150
LKKDIRRCHR MSRRPLPRPD PQGGSPGLRP PISPFSETVR IINRKVKPRE
160 170 180 190 200
PKRNRIILNL KVIDKGAGGG GAGQGAGALA RPKVPSRNRV IGKSKKFSES
210 220 230 240 250
VLRTQIRHMK FGAFALYKPP PAPLVAPSPG KAEASAPGPG LLLAAPAAPY
260 270 280 290 300
DARSSGSSGC PSPTPQSSDP DDTPPKLLPE TVSPSAPSWR EPEVLDLSLP
310 320 330 340 350
PESAATSKRA PPEVTAAAGP APPTAPEPAG ASSEPEAGDW RPEMSPCSNV
360 370 380 390
VVTDVTSNLL TVTIKEFCNP EDFEKVAAGV AGAAGGGGSI GASK
Length:394
Mass (Da):41,918
Last modified:April 8, 2008 - v1
Checksum:i3AC4B5B1DAE37655
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL008583 Genomic DNA. No translation available.
RefSeqiNP_001290423.1. NM_001303494.1.
UniGeneiHs.592201.

Genome annotation databases

EnsembliENST00000216083; ENSP00000216083; ENSG00000183741.
GeneIDi23466.
UCSCiuc062eiy.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL008583 Genomic DNA. No translation available.
RefSeqiNP_001290423.1. NM_001303494.1.
UniGeneiHs.592201.

3D structure databases

ProteinModelPortaliB0QXZ6.
SMRiB0QXZ6. Positions 8-63.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000384490.

Proteomic databases

PaxDbiB0QXZ6.
PeptideAtlasiB0QXZ6.
PRIDEiB0QXZ6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000216083; ENSP00000216083; ENSG00000183741.
GeneIDi23466.
UCSCiuc062eiy.1. human.

Organism-specific databases

CTDi23466.
HGNCiHGNC:1556. CBX6.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2748. Eukaryota.
ENOG41122KC. LUCA.
GeneTreeiENSGT00530000063056.
HOGENOMiHOG000013217.
HOVERGENiHBG003608.

Miscellaneous databases

ChiTaRSiCBX6. human.
GenomeRNAii23466.

Gene expression databases

BgeeiENSG00000183741.
ExpressionAtlasiB0QXZ6. baseline and differential.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
[Graphical view]
PRINTSiPR00504. CHROMODOMAIN.
SMARTiSM00298. CHROMO. 1 hit.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 1 hit.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB0QXZ6_HUMAN
AccessioniPrimary (citable) accession number: B0QXZ6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: September 7, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.