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Protein

Oxaloacetate decarboxylase

Gene

PputGB1_4424

Organism
Pseudomonas putida (strain GB-1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate.UniRule annotation

Catalytic activityi

Oxaloacetate = pyruvate + CO2.UniRule annotation

Cofactori

Mg2+UniRule annotationNote: Binds 1 Mg2+ ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei50 – 501SubstrateUniRule annotation
Metal bindingi88 – 881MagnesiumUniRule annotation
Binding sitei159 – 1591SubstrateUniRule annotation
Binding sitei235 – 2351SubstrateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Decarboxylase, Lyase

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciPPUT76869:GIXB-4502-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Oxaloacetate decarboxylaseUniRule annotation (EC:4.1.1.3UniRule annotation)
Gene namesi
Ordered Locus Names:PputGB1_4424
OrganismiPseudomonas putida (strain GB-1)
Taxonomic identifieri76869 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002157 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 289289Oxaloacetate decarboxylasePRO_0000364067Add
BLAST

Interactioni

Subunit structurei

Homotetramer; dimer of dimers.UniRule annotation

Protein-protein interaction databases

STRINGi76869.PputGB1_4424.

Structurei

3D structure databases

ProteinModelPortaliB0KV77.
SMRiB0KV77. Positions 3-288.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4108JZP. Bacteria.
COG2513. LUCA.
HOGENOMiHOG000220040.
KOiK01003.
OMAiDIWIMAR.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
HAMAPiMF_01299. OadC. 1 hit.
InterProiIPR023687. Oxaloacetate_deCOase_bac.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.

Sequencei

Sequence statusi: Complete.

B0KV77-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKASHQDLR FAFRELLASG SCFHTASVFD PMSARIAADL GFEVGILGGS
60 70 80 90 100
VASLQVLAAP DFALITLSEF VEQATRIGRV AQLPVLADAD HGYGNALNVM
110 120 130 140 150
RTVIELERAG VAALTIEDTL LPAQFGRKST DLIPVEEGVG KIRAALEARV
160 170 180 190 200
DSSLSIIART NAGVLSTEEI IVRTQSYQKA GADAICMVGV KDFEQLEQIA
210 220 230 240 250
EHLTVPLMLV TYGNPNLRDD ERLARLGVRI VVDGHAAYFA AIKATYDCLR
260 270 280
LQRGQQNKSE NLSATELSHT YTQPEDYIRW AKEYMSVEE
Length:289
Mass (Da):31,525
Last modified:March 18, 2008 - v1
Checksum:iFF9C17758B23CA62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000926 Genomic DNA. Translation: ABZ00313.1.
RefSeqiWP_012273974.1. NC_010322.1.

Genome annotation databases

EnsemblBacteriaiABZ00313; ABZ00313; PputGB1_4424.
KEGGippg:PputGB1_4424.
PATRICi19935923. VBIPsePut76638_4426.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000926 Genomic DNA. Translation: ABZ00313.1.
RefSeqiWP_012273974.1. NC_010322.1.

3D structure databases

ProteinModelPortaliB0KV77.
SMRiB0KV77. Positions 3-288.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi76869.PputGB1_4424.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABZ00313; ABZ00313; PputGB1_4424.
KEGGippg:PputGB1_4424.
PATRICi19935923. VBIPsePut76638_4426.

Phylogenomic databases

eggNOGiENOG4108JZP. Bacteria.
COG2513. LUCA.
HOGENOMiHOG000220040.
KOiK01003.
OMAiDIWIMAR.

Enzyme and pathway databases

BioCyciPPUT76869:GIXB-4502-MONOMER.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
HAMAPiMF_01299. OadC. 1 hit.
InterProiIPR023687. Oxaloacetate_deCOase_bac.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiOADC_PSEPG
AccessioniPrimary (citable) accession number: B0KV77
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: March 18, 2008
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.