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B0KUF6 (B0KUF6_PSEPG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ornithine carbamoyltransferase HAMAP-Rule MF_01109
Short name=OTCase HAMAP-Rule MF_01109
EC=2.1.3.3 HAMAP-Rule MF_01109
Gene names
Name:argF HAMAP-Rule MF_01109
Ordered Locus Names:PputGB1_4333
OrganismPseudomonas putida (strain GB-1) [Complete proteome] [HAMAP] EMBL ABZ00222.1
Taxonomic identifier76869 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas ›

Protein attributes

Sequence length306 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline. HAMAP-Rule MF_01109 SAAS SAAS002292

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 1/3. HAMAP-Rule MF_01109

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01109 SAAS SAAS002292.

Sequence similarities

Belongs to the ATCase/OTCase family. HAMAP-Rule MF_01109 RuleBase RU003634

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region53 – 575Carbamoyl phosphate binding By similarity HAMAP-Rule MF_01109
Region258 – 2614Ornithine binding By similarity HAMAP-Rule MF_01109

Sites

Binding site1041Carbamoyl phosphate By similarity HAMAP-Rule MF_01109
Binding site1311Carbamoyl phosphate By similarity HAMAP-Rule MF_01109
Site281Important for structural integrity By similarity HAMAP-Rule MF_01109
Site1441Important for structural integrity By similarity HAMAP-Rule MF_01109

Sequences

Sequence LengthMass (Da)Tools
B0KUF6 [UniParc].

Last modified March 18, 2008. Version 1.
Checksum: 819791C9370FA2EB

FASTA30634,479
        10         20         30         40         50         60 
MSARHFLSLL DFTTDELLGV IRRGIELKDL RKRGVLFEPL KNRVLGMIFE KSSTRTRVSF 

        70         80         90        100        110        120 
EAGMIQLGGQ AIFLSPRDTQ LGRGEPIGDS AIVLSSMLDV VMIRTHAHST LTEFAAKSRV 

       130        140        150        160        170        180 
PVINGLSDES HPCQLLADMQ TFLEHRGSIQ GKTVTWIGDG FNMCNSYIEA ARQFDFQLRI 

       190        200        210        220        230        240 
ACPEGYEPDQ RFMALGGDRV QIIRDVKQAV RDAHLVVTDV WTSMGQEEET ARRLAHFAPY 

       250        260        270        280        290        300 
QVTRELLDLA APDVLFMHCL PAHRGEEISQ DLLDDPRSVA WDEAENRLHA QKALLEFLVE 


PAYHHA

« Hide

References

[1]"Complete sequence of Pseudomonas putida GB-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., McCarthy J.K., Richardson P.
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GB-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000926 Genomic DNA. Translation: ABZ00222.1.
RefSeqYP_001670557.1. NC_010322.1.

3D structure databases

ProteinModelPortalB0KUF6.
ModBaseSearch...

Protein-protein interaction databases

STRING76869.PputGB1_4333.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABZ00222; ABZ00222; PputGB1_4333.
GeneID5872140.
KEGGppg:PputGB1_4333.
PATRIC19935741. VBIPsePut76638_4336.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0078.
HOGENOMHOG000022686.
KOK00611.
OMAIMIRTTE.
ProtClustDBPRK00779.

Enzyme and pathway databases

BioCycPPUT76869:GIXB-4410-MONOMER.
UniPathwayUPA00068; UER00112.

Family and domain databases

HAMAPMF_01109. OTCase.
InterProIPR006132. Asp/Orn_carbamoyltranf_P-bd.
IPR006130. Asp/Orn_carbamoylTrfase.
IPR006131. Asp_carbamoyltransf_Asp/Orn-bd.
IPR002292. Orn/put_carbamltrans.
IPR024904. Orn_carbamltrans.
[Graphical view]
PfamPF00185. OTCace. 1 hit.
PF02729. OTCace_N. 1 hit.
[Graphical view]
PRINTSPR00100. AOTCASE.
PR00102. OTCASE.
SUPFAMSSF53671. Asp/Orn_carbamoyltranf. 1 hit.
TIGRFAMsTIGR00658. orni_carb_tr. 1 hit.
PROSITEPS00097. CARBAMOYLTRANSFERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0KUF6_PSEPG
AccessionPrimary (citable) accession number: B0KUF6
Entry history
Integrated into UniProtKB/TrEMBL: March 18, 2008
Last sequence update: March 18, 2008
Last modified: May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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