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B0KTW4 (B0KTW4_PSEPG) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PputGB1_1346
OrganismPseudomonas putida (strain GB-1) [Complete proteome] [HAMAP] EMBL ABY97253.1
Taxonomic identifier76869 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B0KTW4 [UniParc].

Last modified March 18, 2008. Version 1.
Checksum: 551FC72B42338492

FASTA46449,107
        10         20         30         40         50         60 
MSRIETDSLG PVEVPEDAYW GAQTQRSLIN FAIGKERMPL AVLHALALIK KAAARVNDRN 

        70         80         90        100        110        120 
GDLPADIARL IEQAADEVLD GKHDDQFPLV VWQTGSGTQS NMNVNEVIAG RANELAGKGR 

       130        140        150        160        170        180 
GGKAPVHPND HVNRSQSSND CFPTAMHIAA AQAVHEQLLP AIAELSSGLA ELSARHNKLV 

       190        200        210        220        230        240 
KTGRTHMMDA TPITFGQEVS AFVAQLDYAQ RAIRATLPAV CELAQGGTAV GTGLNAPHGF 

       250        260        270        280        290        300 
AEAIAAELAA ESGLPFVTAP NKFAALAGHE PLTSLAGALK TLAVALMKIA NDLRLLGSGP 

       310        320        330        340        350        360 
RAGLAEVRLP ANEPGSSIMP GKVNPTQCEA LSMLACQVLG NDAAIGFAAS QGHLQLNVFK 

       370        380        390        400        410        420 
PVIIHNLLQS VELLADGCRN FQLHCVAGIE PDAQQMAAHL ERGLMLVTAL NPHIGYDKAA 

       430        440        450        460 
EIAKKAYSEG KTLREAALEL KYLTNEQFDQ WVRPENMLAP GGHG 

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References

[1]"Complete sequence of Pseudomonas putida GB-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., McCarthy J.K., Richardson P.
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GB-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000926 Genomic DNA. Translation: ABY97253.1.
RefSeqYP_001667589.1. NC_010322.1.

3D structure databases

ProteinModelPortalB0KTW4.
SMRB0KTW4. Positions 3-458.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0KTW4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5869110.
GenomeReviewsGene locus PputGB1_1346 in contig CP000926_GR.
KEGGppg:PputGB1_1346.
PATRIC19929673. VBIPsePut76638_1352.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG284369.
OMAAGHEPLT.
ProtClustDBPRK12425.

Enzyme and pathway databases

BioCycPPUT76869:PPUTGB1_1346-MONOMER.

Family and domain databases

HAMAPMF_00743. FumaraseC.
[Tree]
InterProIPR005677. Fum_hydII.
IPR018951. Fumarase_C_C.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR024083. L-Aspartase-like_N.
IPR022761. Lyase1_N.
[Graphical view]
Gene3DG3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KOK01679.
PfamPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00979. FumC_II. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0KTW4_PSEPG
AccessionPrimary (citable) accession number: B0KTW4
Entry history
Integrated into UniProtKB/TrEMBL: March 18, 2008
Last sequence update: March 18, 2008
Last modified: January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)